RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 ABHD14BQ96IU4 210 aa9.32□□□□□ -0.92
RTN3-206ENST00000377819 SOSTQ9BQB4 213 aa9.32□□□□□ -0.92
RTN3-206ENST00000377819 RBKSQ9H477 322 aa9.32□□□□□ -0.92
RTN3-206ENST00000377819 TUBD1Q9UJT1 453 aa9.32□□□□□ -0.92
RTN3-206ENST00000377819 SLC25A15Q9Y619 301 aa9.32□□□□□ -0.92
RTN3-206ENST00000377819 TRGV2A0A075B6R0 118 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 NPIPB4C9JG80 1138 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 CCL2P13500 99 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 CTLA4P16410 223 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 EPHA8P29322 1005 aaPredicted RBP9.31□□□□□ -0.92
RTN3-206ENST00000377819 ZFP36L2P47974 494 aaKnown RBP9.31□□□□□ -0.92
RTN3-206ENST00000377819 HBBP68871 147 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 IBA57Q5T440 356 aaKnown RBP9.31□□□□□ -0.92
RTN3-206ENST00000377819 ISOC2Q96AB3 205 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 STARD10Q9Y365 291 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 EMDP50402 254 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 PSMG4Q5JS54 123 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 INO80CQ6PI98 192 aaPredicted RBP9.31□□□□□ -0.92
RTN3-206ENST00000377819 GAPTQ8N292 157 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 CCL4L1Q8NHW4 92 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 CNOT1A5YKK6 2376 aaKnown RBP9.31□□□□□ -0.92
RTN3-206ENST00000377819 PPYP01298 95 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 ZNF688P0C7X2 276 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 PSG6Q00889 435 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 HIST1H1AQ02539 215 aaPredicted RBP9.31□□□□□ -0.92
RTN3-206ENST00000377819 C1orf220Q5T0J3 134 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 FUNDC1Q8IVP5 155 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 TMEM86BQ8N661 226 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 OR8D4Q8NGM9 314 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 OR2K2Q8NGT1 345 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 ZNF418Q8TF45 676 aaPredicted RBP9.31□□□□□ -0.92
RTN3-206ENST00000377819 PMCHL2Q9BQD1 86 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 PRSS27Q9BQR3 290 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 OR51B2Q9Y5P1 312 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 TAF1P21675 1872 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 DUOX1Q9NRD9 1551 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 TRAV8-6A0A0B4J262 113 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 CD8AP01732 235 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 HOXD4P09016 255 aaPredicted RBP9.31□□□□□ -0.92
RTN3-206ENST00000377819 FTH1P19P0C7X4 201 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 REG1BP48304 166 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 TDGF1P3P51864 188 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 PSG9Q00887 426 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 SRSF6Q13247 344 aaKnown RBP9.31□□□□□ -0.92
RTN3-206ENST00000377819 UBE2V2Q15819 145 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 MRGPRFQ96AM1 343 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 ALG14Q96F25 216 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 NEU1Q99519 415 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 AICDAQ9GZX7 198 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 RAB33BQ9H082 229 aa9.31□□□□□ -0.92
RTN3-206ENST00000377819 TRBV20OR9-2A0A075B6H5 130 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 F8WEM9 126 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 NDUFA2O43678 99 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 ATP5J2P56134 94 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 OR10S1Q8NGN2 331 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 VSTM2LQ96N03 204 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 ZNF714Q96N38 554 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 ISG20L2Q9H9L3 353 aaKnown RBP9.3□□□□□ -0.92
RTN3-206ENST00000377819 RCC2Q9P258 522 aaKnown RBP9.3□□□□□ -0.92
RTN3-206ENST00000377819 ANKRD20A5PA0PJZ0 165 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 LNP1A1A4G5 178 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 GGTLC3B5MD39 225 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 SLC25A53Q5H9E4 307 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 DTX2Q86UW9 622 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 GPBAR1Q8TDU6 330 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 SF3B5Q9BWJ5 86 aaKnown RBP9.3□□□□□ -0.92
RTN3-206ENST00000377819 F11RQ9Y624 299 aaKnown RBP9.3□□□□□ -0.92
RTN3-206ENST00000377819 PAPPA2Q9BXP8 1791 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 ARFGEF3Q5TH69 2177 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 SHISA8B8ZZ34 492 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 NKX2-8O15522 239 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 THY1P04216 161 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 PATE4P0C8F1 98 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 PCSK4Q6UW60 755 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 C10orf35Q96D05 121 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 RHOVQ96L33 236 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 CCL28Q9NRJ3 127 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 TMEM106BQ9NUM4 274 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 AURKAIP1Q9NWT8 199 aaPredicted RBP9.3□□□□□ -0.92
RTN3-206ENST00000377819 WNK2Q9Y3S1 2297 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 TMEM229AB2RXF0 380 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 H3BQ15 152 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 MGST3O14880 152 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 ADAP1O75689 374 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 CLDN14O95500 239 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 CNRIP1Q96F85 164 aaPredicted RBP9.3□□□□□ -0.92
RTN3-206ENST00000377819 RNF122Q9H9V4 155 aa9.3□□□□□ -0.92
RTN3-206ENST00000377819 TMEM210A6NLX4 147 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 EDIL3O43854 480 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 ZFPL1O95159 310 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 HPRT1P00492 218 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 DAOP14920 347 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 CA7P43166 264 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 SRSF12Q8WXF0 261 aaKnown RBP9.29□□□□□ -0.92
RTN3-206ENST00000377819 SMDT1Q9H4I9 107 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 SNED1Q8TER0 1413 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 A1L4Q6 167 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 HMSDA8MTL9 139 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 LEUTXA8MZ59 168 aa9.29□□□□□ -0.92
RTN3-206ENST00000377819 IFNL4K9M1U5 179 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms