RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 BDP1A6H8Y1 2624 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 B4DEV8 164 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 GAPDHP04406 335 aaKnown RBP9.38□□□□□ -0.91
HIF3A-205ENST00000377670 FNDC7Q5VTL7 733 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 NSUN5P2Q63ZY6 315 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 EBLN2Q6P2I7 272 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 LILRB1Q8NHL6 650 aaPredicted RBP9.38□□□□□ -0.91
HIF3A-205ENST00000377670 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.38□□□□□ -0.91
HIF3A-205ENST00000377670 IRF3Q14653 427 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 C7orf69Q9H7B7 122 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 SRD5A3Q9H8P0 318 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 SLC45A2Q9UMX9 530 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 IGHV3OR16-12A0A075B7B8 117 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 PPIAL4CA0A0B4J2A2 164 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 FAM74A7A6NL05 159 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 PPIAL4GP0DN37 164 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 HOXB1P14653 301 aaPredicted RBP9.38□□□□□ -0.91
HIF3A-205ENST00000377670 HOXA6P31267 233 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 ARF6P62330 175 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 IL24Q13007 206 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 GABRA6Q16445 453 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 FAM74A3Q4VXF1 159 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 SIRT7Q9NRC8 400 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 WIPI2Q9Y4P8 454 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 C11orf94C9JXX5 98 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 J3QT63 122 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 SULT1A2P50226 295 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 C3orf56Q8N813 242 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 MANBALQ9NQG1 85 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 NKX2-6A6NCS4 301 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 MBPP02686 304 aaPredicted RBP9.37□□□□□ -0.91
HIF3A-205ENST00000377670 MDKP21741 143 aaPredicted RBP9.37□□□□□ -0.91
HIF3A-205ENST00000377670 RPS4Y1P22090 263 aaKnown RBP9.37□□□□□ -0.91
HIF3A-205ENST00000377670 IFITM2Q01629 132 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 PCSK4Q6UW60 755 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 OR1L4Q8NGR5 311 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 PRSS27Q9BQR3 290 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 OGG1O15527 345 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 EFEMP2O95967 443 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 VSIG10L2P0DP72 767 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 CD59P13987 128 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 DEGS2Q6QHC5 323 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 C12orf54Q6X4T0 127 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 LIAT1Q6ZQX7 453 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 TBC1D26Q86UD7 250 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 OR10G8Q8NGN5 311 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 FRRS1LQ9P0K9 344 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 DOK5Q9P104 306 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 ZG16O60844 167 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 CTSDP07339 412 aaPredicted RBP9.37□□□□□ -0.91
HIF3A-205ENST00000377670 RCC1P18754 421 aaPredicted RBP9.37□□□□□ -0.91
HIF3A-205ENST00000377670 HIST3H3Q16695 136 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 TBX15Q96SF7 602 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 AICDAQ9GZX7 198 aa9.37□□□□□ -0.91
HIF3A-205ENST00000377670 HLA-GP17693 338 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 RPS4Y2Q8TD47 263 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 MRPL24Q96A35 216 aaKnown RBP9.36□□□□□ -0.91
HIF3A-205ENST00000377670 PIPOXQ9P0Z9 390 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 SUCLG1P53597 346 aaKnown RBP9.36□□□□□ -0.91
HIF3A-205ENST00000377670 FAM106AQ4KMX7 169 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 J3KRW8 73 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 ZNF385CQ66K41 422 aaPredicted RBP9.36□□□□□ -0.91
HIF3A-205ENST00000377670 ZNF385AQ96PM9 386 aaKnown RBP9.36□□□□□ -0.91
HIF3A-205ENST00000377670 VAX2Q9UIW0 290 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 WASHC3Q9Y3C0 194 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 SOCS1O15524 211 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 CHST1O43916 411 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 CD81P60033 236 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 HARBI1Q96MB7 349 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 TNFSF18Q9UNG2 199 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 A0A1W2PRX2 142 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 MUC1P15941 1255 aaPredicted RBP9.36□□□□□ -0.91
HIF3A-205ENST00000377670 REG1BP48304 166 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 PLPPR5Q32ZL2 321 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 LINC00518Q8N0U6 118 aa9.36□□□□□ -0.91
HIF3A-205ENST00000377670 LCN2P80188 198 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 MRPL54Q6P161 138 aaKnown RBP9.35□□□□□ -0.91
HIF3A-205ENST00000377670 PET117Q6UWS5 81 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 MAP1LC3CQ9BXW4 147 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 PDCD6O75340 191 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 NGFRP08138 427 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 CD99P14209 185 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 PRDX2P32119 198 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 CDKN1AP38936 164 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 EWSR1Q01844 656 aaKnown RBP eCLIP9.35□□□□□ -0.91
HIF3A-205ENST00000377670 FAM27E3Q08E93 113 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 UNQ5815/PRO19632Q6UWF5 114 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 TMEM91Q6ZNR0 172 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 MESP1Q9BRJ9 268 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 KLHDC2Q9Y2U9 406 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 SIRT4Q9Y6E7 314 aaPredicted RBP9.35□□□□□ -0.91
HIF3A-205ENST00000377670 MFSD2BA6NFX1 497 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 NMBP08949 121 aa9.35□□□□□ -0.91
HIF3A-205ENST00000377670 ZNF770Q6IQ21 691 aaPredicted RBP9.35□□□□□ -0.91
HIF3A-205ENST00000377670 PUSL1Q8N0Z8 303 aaKnown RBP9.35□□□□□ -0.91
HIF3A-205ENST00000377670 C1orf162Q8NEQ5 155 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms