RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 BEST4Q8NFU0 473 aa11.66□□□□□ -0.54
UBE4B-203ENST00000377153 PIFOQ8TCI5 191 aa11.66□□□□□ -0.54
UBE4B-203ENST00000377153 C15orf40Q8WUR7 153 aa11.66□□□□□ -0.54
UBE4B-203ENST00000377153 ST6GALNAC6Q969X2 333 aa11.66□□□□□ -0.54
UBE4B-203ENST00000377153 IFI27L2Q9H2X8 130 aa11.66□□□□□ -0.54
UBE4B-203ENST00000377153 BEX1Q9HBH7 125 aa11.66□□□□□ -0.54
UBE4B-203ENST00000377153 C1RLQ9NZP8 487 aa11.66□□□□□ -0.54
UBE4B-203ENST00000377153 ANXA10Q9UJ72 324 aa11.66□□□□□ -0.54
UBE4B-203ENST00000377153 ZNF221Q9UK13 617 aa11.66□□□□□ -0.54
UBE4B-203ENST00000377153 MRPS7Q9Y2R9 242 aaKnown RBP11.66□□□□□ -0.54
UBE4B-203ENST00000377153 CEPT1Q9Y6K0 416 aa11.66□□□□□ -0.54
UBE4B-203ENST00000377153 IGKV1-6A0A0C4DH72 117 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 CHST1O43916 411 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 SSX5O60225 188 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 IGKV1D-33P01593 117 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 IGKV1-33P01594 117 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 SNRNP70P08621 437 aaKnown RBP11.65□□□□□ -0.54
UBE4B-203ENST00000377153 TMEM11P17152 192 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 CD24P25063 80 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 PRSS3P35030 304 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 GPR12P47775 334 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 SPATA3Q8NHX4 192 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 DYNC2LI1Q8TCX1 351 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 SLC25A33Q9BSK2 321 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 C6orf62Q9GZU0 229 aaPredicted RBP11.65□□□□□ -0.54
UBE4B-203ENST00000377153 EXTL2Q9UBQ6 330 aa11.65□□□□□ -0.54
UBE4B-203ENST00000377153 M0QZK8 103 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 ZNF701M0R085 212 aaPredicted RBP11.64□□□□□ -0.55
UBE4B-203ENST00000377153 OR2F2O95006 317 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 COMPP49747 757 aaPredicted RBP11.64□□□□□ -0.55
UBE4B-203ENST00000377153 AWAT1Q58HT5 328 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 CNIH2Q6PI25 160 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 ZNF833PQ6ZTB9 187 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 HOGA1Q86XE5 327 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 THNSL2Q86YJ6 484 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 SNX29P2Q8IUI4 249 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 C3orf56Q8N813 242 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 OR2T10Q8NGZ9 312 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 OR2T6Q8NHC8 308 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 CFHR4Q92496 578 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 C11orf54Q9H0W9 315 aaPredicted RBP11.64□□□□□ -0.55
UBE4B-203ENST00000377153 OR2D2Q9H210 308 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 SCPEP1Q9HB40 452 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 NECAP2Q9NVZ3 263 aa11.64□□□□□ -0.55
UBE4B-203ENST00000377153 FBN1P35555 2871 aaKnown RBP11.64□□□□□ -0.55
UBE4B-203ENST00000377153 MEIS3P1A6NDR6 274 aa11.63□□□□□ -0.55
UBE4B-203ENST00000377153 PTHLHP12272 177 aa11.63□□□□□ -0.55
UBE4B-203ENST00000377153 CD1BP29016 333 aa11.63□□□□□ -0.55
UBE4B-203ENST00000377153 OR3A3P47888 321 aa11.63□□□□□ -0.55
UBE4B-203ENST00000377153 TAS2R46P59540 309 aa11.63□□□□□ -0.55
UBE4B-203ENST00000377153 HABP2Q14520 560 aaPredicted RBP11.63□□□□□ -0.55
UBE4B-203ENST00000377153 H1FOOQ8IZA3 346 aaPredicted RBP11.63□□□□□ -0.55
UBE4B-203ENST00000377153 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.63□□□□□ -0.55
UBE4B-203ENST00000377153 ABHD14BQ96IU4 210 aa11.63□□□□□ -0.55
UBE4B-203ENST00000377153 PRSS22Q9GZN4 317 aa11.63□□□□□ -0.55
UBE4B-203ENST00000377153 TOLLIPQ9H0E2 274 aa11.63□□□□□ -0.55
UBE4B-203ENST00000377153 PARP12Q9H0J9 701 aaKnown RBP11.63□□□□□ -0.55
UBE4B-203ENST00000377153 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
UBE4B-203ENST00000377153 IGKV1D-8A0A087WSZ0 117 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 IGHV3-72A0A0B4J1Y9 119 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 PEX14O75381 377 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 TSPAN9O75954 239 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 MOSP00540 346 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 OR8U9P0C7N5 309 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 MDKP21741 143 aaPredicted RBP11.62□□□□□ -0.55
UBE4B-203ENST00000377153 RELBQ01201 579 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 LSAMPQ13449 338 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 RPL39P5Q59GN2 51 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 C11orf88Q6PI97 169 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 CCBE1Q6UXH8 406 aaPredicted RBP11.62□□□□□ -0.55
UBE4B-203ENST00000377153 Q6ZSV7 163 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 LAX1Q8IWV1 398 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 ODF3L1Q8IXM7 274 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 GVQW1Q8N7I0 195 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 OR8U1Q8NH10 309 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 MCFD2Q8NI22 146 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 RBM14Q96PK6 669 aaKnown RBP11.62□□□□□ -0.55
UBE4B-203ENST00000377153 AGMATQ9BSE5 352 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 DCUN1D5Q9BTE7 237 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 MRPL20Q9BYC9 149 aaKnown RBP11.62□□□□□ -0.55
UBE4B-203ENST00000377153 RBM38Q9H0Z9 239 aaKnown RBP11.62□□□□□ -0.55
UBE4B-203ENST00000377153 NDUFA13Q9P0J0 144 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 MMP24Q9Y5R2 645 aa11.62□□□□□ -0.55
UBE4B-203ENST00000377153 CLPSL1A2RUU4 121 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 OR5H14A6NHG9 310 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 FAM90A9PA6NNJ1 464 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 TPPPO94811 219 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 LUMP51884 338 aaPredicted RBP11.61□□□□□ -0.55
UBE4B-203ENST00000377153 ACTBP60709 375 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 HNF4GQ14541 408 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 OR5AP2Q8NGF4 316 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 TAF15Q92804 592 aaKnown RBP eCLIP11.61□□□□□ -0.55
UBE4B-203ENST00000377153 C16orf95Q9H693 158 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 RABL2AQ9UBK7 228 aaPredicted RBP11.61□□□□□ -0.55
UBE4B-203ENST00000377153 RNF150Q9ULK6 438 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 RABL2BQ9UNT1 228 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 OR2W1Q9Y3N9 320 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 RNF114Q9Y508 228 aa11.61□□□□□ -0.55
UBE4B-203ENST00000377153 NCBP2LA6PVI3 153 aaKnown RBP11.6□□□□□ -0.55
UBE4B-203ENST00000377153 H7C2Y5 167 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms