RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	TAS2R3	Q9NYW6	316 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	FAM24A	A6NFZ4	105 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	ICMT	O60725	284 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	ATG12	O94817	140 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	SLC25A28	Q96A46	364 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	NRIP2	Q9BQI9	281 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	ATPIF1	Q9UII2	106 aa		11.33	□□□□□ -0.6
DDR1-225	ENST00000376568	IGKV1D-13	A0A0B4J2D9	117 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	IGKV1-13	P0DP09	117 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	ZNF273	Q14593	569 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	ZNF626	Q68DY1	528 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	SIGIRR	Q6IA17	410 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	RYDEN	Q9NUL5	291 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	MELTF	P08582	738 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	PRRX1	P54821	245 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	CYCS	P99999	105 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	ZBTB37	Q5TC79	503 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	POC1A	Q8NBT0	407 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	FAM103A1	Q9BTL3	118 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	YAE1D1	Q9NRH1	226 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	LIN7C	Q9NUP9	197 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	FBXO7	Q9Y3I1	522 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	SETX	Q7Z333	2677 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	RELN	P78509	3460 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	ZNF818P	Q6ZRF7	136 aa		11.32	□□□□□ -0.6
DDR1-225	ENST00000376568	NCKAP5	O14513	1909 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	FPR2	P25090	351 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	FAM222B	Q8WU58	562 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	RHOV	Q96L33	236 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	HYLS1	Q96M11	299 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	HEXA-AS1	Q9H8Q6	139 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568		A6NNC1	897 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568		K7N7A8	449 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	SRSF10	O75494	262 aa	Known RBP	11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	CD1A	P06126	327 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	CLEC12B	Q2HXU8	276 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	EAF1	Q96JC9	268 aa	Predicted RBP	11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	MS4A10	Q96PG2	267 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	HIPK2	Q9H2X6	1198 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	NAA60	Q9H7X0	242 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568		Q9N2K0	584 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	DOK5	Q9P104	306 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	CLEC18A	A5D8T8	446 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	TXNL1	O43396	289 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	CAMLG	P49069	296 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	HIST1H3A	P68431	136 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	SMUG1	Q53HV7	270 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	HIST2H3PS2	Q5TEC6	136 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	HIST2H3A	Q71DI3	136 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	SLC38A6	Q8IZM9	456 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	CLEC18C	Q8NCF0	446 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	TRIM63	Q969Q1	353 aa		11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	RCL1	Q9Y2P8	373 aa	Known RBP	11.31	□□□□□ -0.6
DDR1-225	ENST00000376568	TRAV40	A0A0B4J280	105 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	IL13RA2	Q14627	380 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	BIVM	Q86UB2	503 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	TMED6	Q8WW62	240 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	R3HDM4	Q96D70	268 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	EIF5A2	Q9GZV4	153 aa	Known RBP	11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	IGKV1D-17	A0A075B6S4	117 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	MPTX1	A8MV57	137 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	ZP1	P60852	638 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	RAP2B	P61225	183 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	DMRTA2	Q96SC8	542 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	CCL1	P22362	96 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	PSMB6	P28072	239 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	DEFA5	Q01523	94 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	ANGPTL6	Q8NI99	470 aa		11.3	□□□□□ -0.6
DDR1-225	ENST00000376568	ATR	Q13535	2644 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568		I3L521	148 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	S100A1	P23297	94 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568		Q5BKY6	102 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	OVCH2	Q7RTZ1	564 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	TMEM219	Q86XT9	240 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	MAST4	O15021	2626 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	HTR2B	P41595	481 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	SEZ6L2	Q6UXD5	910 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	MOB1B	Q7L9L4	216 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	THNSL2	Q86YJ6	484 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	FAM213B	Q8TBF2	198 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	FGF23	Q9GZV9	251 aa	Predicted RBP	11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	PSENEN	Q9NZ42	101 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	SRRM5	B3KS81	715 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	TMEM178B	H3BS89	294 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	CDK2AP1	O14519	115 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	LIPF	P07098	398 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	INHBB	P09529	407 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	OR5G3	P0C626	314 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	MUC1	P15941	1255 aa	Predicted RBP	11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	CD300LF	Q8TDQ1	290 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	C20orf24	Q9BUV8	137 aa		11.29	□□□□□ -0.6
DDR1-225	ENST00000376568	CRYBA1	P05813	215 aa		11.28	□□□□□ -0.6

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