RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 RPH3ALQ9UNE2 315 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 PHF3Q92576 2039 aaKnown RBP10.4□□□□□ -0.75
C9orf3-203ENST00000375315 IGHV2-70DA0A0C4DH43 119 aa10.4□□□□□ -0.75
C9orf3-203ENST00000375315 TMEM238C9JI98 176 aa10.4□□□□□ -0.75
C9orf3-203ENST00000375315 F6UZH7 168 aa10.4□□□□□ -0.75
C9orf3-203ENST00000375315 DXOO77932 396 aaKnown RBP10.4□□□□□ -0.75
C9orf3-203ENST00000375315 BMP5P22003 454 aa10.4□□□□□ -0.75
C9orf3-203ENST00000375315 PPP1CBP62140 327 aa10.4□□□□□ -0.75
C9orf3-203ENST00000375315 FMODQ06828 376 aa10.4□□□□□ -0.75
C9orf3-203ENST00000375315 FAM180AQ6UWF9 173 aa10.4□□□□□ -0.75
C9orf3-203ENST00000375315 APH1AQ96BI3 265 aa10.4□□□□□ -0.75
C9orf3-203ENST00000375315 CSTL1Q9H114 145 aa10.4□□□□□ -0.75
C9orf3-203ENST00000375315 CHD8Q9HCK8 2581 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 PRSS47A8MTI9 375 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 GYPAP02724 150 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 AADACP22760 399 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 CDKN1AP38936 164 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 CXorf66Q5JRM2 361 aaPredicted RBP10.39□□□□□ -0.75
C9orf3-203ENST00000375315 FAM78BQ5VT40 261 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 BET1LQ9NYM9 111 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 KLHL13Q9P2N7 655 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 RNF115Q9Y4L5 304 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 ZNHIT1O43257 154 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 EFNA2O43921 213 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 HERV-K104P61576 105 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 KISS1Q15726 138 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 SPATA45Q537H7 98 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 TMPRSS7Q7RTY8 843 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 OR11L1Q8NGX0 322 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 DDIT4LQ96D03 193 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 NUDT11Q96G61 164 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 RNF2Q99496 336 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 SAMD10Q9BYL1 202 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 PARLQ9H300 379 aa10.39□□□□□ -0.75
C9orf3-203ENST00000375315 UBE2J1Q9Y385 318 aaPredicted RBP10.39□□□□□ -0.75
C9orf3-203ENST00000375315 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 PLPP3O14495 311 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 PSMB3P49720 205 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 MSMO1Q15800 293 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 ZNF726P1Q15940 193 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 EXT1Q16394 746 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 ASCL5Q7RTU5 278 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 RSG1Q9BU20 258 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 NCOR2Q9Y618 2525 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 IGHV2OR16-5A0A0B4J2B6 119 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 OR6C6A6NF89 314 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 NKX2-8O15522 239 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 ZNF205O95201 554 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 MDH2P40926 338 aaKnown RBP10.38□□□□□ -0.75
C9orf3-203ENST00000375315 POU3F1Q03052 451 aaPredicted RBP10.38□□□□□ -0.75
C9orf3-203ENST00000375315 MORN2Q502X0 79 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 C1QL2Q7Z5L3 287 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 CALHM1Q8IU99 346 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 ODF3L1Q8IXM7 274 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 TMEM234Q8WY98 164 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 PGAM5Q96HS1 289 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 CHCHD2Q9Y6H1 151 aaPredicted RBP10.38□□□□□ -0.75
C9orf3-203ENST00000375315 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 A0A0U1RQV5 110 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 A0A1W2PNV4 684 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 NPIPA5E9PKD4 350 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 TNFSF12O43508 249 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 MMP23AO75900 390 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 OPRM1P35372 400 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 SRYQ05066 204 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 UNQ5815/PRO19632Q6UWF5 114 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 MCEMP1Q8IX19 187 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 MRPL30Q8TCC3 161 aaKnown RBP10.38□□□□□ -0.75
C9orf3-203ENST00000375315 LHX4Q969G2 390 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 LIN37Q96GY3 246 aaPredicted RBP10.38□□□□□ -0.75
C9orf3-203ENST00000375315 PSMG3Q9BT73 122 aaPredicted RBP10.38□□□□□ -0.75
C9orf3-203ENST00000375315 NPIPA1Q9UND3 350 aa10.38□□□□□ -0.75
C9orf3-203ENST00000375315 TRAV30A0A087WSZ9 112 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 M0QZ24 198 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 ADAM20O43506 726 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 CHST1O43916 411 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 WDR1O75083 606 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 VENTXO95231 258 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 RFPL3SP0C7P2 107 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 DTYMKP23919 212 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 S100A7P31151 101 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 TLE3Q04726 772 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 CDCP2Q5VXM1 449 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 DOK3Q7L591 496 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 UEVLDQ8IX04 471 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 C1orf174Q8IYL3 243 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 C11orf40Q8WZ69 217 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 PINX1Q96BK5 328 aaKnown RBP10.37□□□□□ -0.75
C9orf3-203ENST00000375315 TMEM222Q9H0R3 208 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 RBM7Q9Y580 266 aaKnown RBP10.37□□□□□ -0.75
C9orf3-203ENST00000375315 FAM166BA8MTA8 275 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 MPPED1O15442 326 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 TMEM50AO95807 157 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 P04436 131 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 ESDP10768 282 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 PTGDSP41222 190 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 RRADP55042 308 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 SERF2P84101 59 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 ID3Q02535 119 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 EIF3IQ13347 325 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms