RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FAM90A27PA6NNH2 459 aa14.96□□□□□ -0.01
HLA-DQB1-201ENST00000374943 YPEL1O60688 119 aa14.96□□□□□ -0.01
HLA-DQB1-201ENST00000374943 CD3EP07766 207 aa14.96□□□□□ -0.01
HLA-DQB1-201ENST00000374943 CATR1Q13166 79 aa14.96□□□□□ -0.01
HLA-DQB1-201ENST00000374943 RPL7L1Q6DKI1 246 aaKnown RBP14.96□□□□□ -0.01
HLA-DQB1-201ENST00000374943 EIF4E3Q8N5X7 224 aaKnown RBP14.96□□□□□ -0.01
HLA-DQB1-201ENST00000374943 RFESDQ8TAC1 157 aa14.96□□□□□ -0.01
HLA-DQB1-201ENST00000374943 YPEL2Q96QA6 119 aa14.96□□□□□ -0.01
HLA-DQB1-201ENST00000374943 AGMATQ9BSE5 352 aa14.96□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ITPR1Q14643 2758 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 SIGLEC5O15389 551 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 IGKV1-5P01602 117 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 POLR2GP62487 172 aaKnown RBP eCLIP14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 CXorf66Q5JRM2 361 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 EIF5AL1Q6IS14 154 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ZNF66Q6ZN08 573 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 HSD17B13Q7Z5P4 300 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 C1orf87Q8N0U7 546 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 UBAC2Q8NBM4 344 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LRRC46Q96FV0 321 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ARV1Q9H2C2 271 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 SAP30LQ9HAJ7 183 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 CALYQ9NYX4 217 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 RNF150Q9ULK6 438 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 HCFC1P51610 2035 aa14.95□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ROS1P08922 2347 aa14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 IGHV3-43A0A0B4J1X8 118 aa14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LGALS8O00214 317 aa14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ITGB1BP1O14713 200 aa14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 IGHV3-43DP0DP04 118 aa14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 SELLP14151 372 aa14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 EDDM3BP56851 147 aa14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LOXL3P58215 753 aa14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 OR2C3Q8N628 320 aa14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 BBC3Q96PG8 261 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LYRM2Q9NU23 88 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 RNF115Q9Y4L5 304 aa14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 DIDO1Q9BTC0 2240 aaKnown RBP14.94□□□□□ -0.02
HLA-DQB1-201ENST00000374943 NKX6-3A6NJ46 265 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 KIAA1324LA8MWY0 1029 aaPredicted RBP14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ZNF16P17020 682 aaPredicted RBP14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 APOBEC3AP31941 199 aaPredicted RBP14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 MORN2Q502X0 79 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TGIF2LYQ8IUE0 185 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 RNASE11Q8TAA1 199 aaKnown RBP14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 RNF141Q8WVD5 230 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TMED6Q8WW62 240 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 HSD17B10Q99714 261 aaKnown RBP14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LINC00574Q9H8X3 128 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 DCAF16Q9NXF7 216 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TRAV38-1A0A0B4J264 116 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 B9A039 149 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 I3L521 148 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 SSSCA1O60232 199 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 GYPAP02724 150 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 FGF2P09038 288 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 AKR1C2P52895 323 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 RPL30P62888 115 aaKnown RBP14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 EWSR1Q01844 656 aaKnown RBP eCLIP14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 C17orf58Q2M2W7 97 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TMEM30BQ3MIR4 351 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ZNF808Q8N4W9 903 aaPredicted RBP14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 CORO2AQ92828 525 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 CCL13Q99616 98 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 SLC25A31Q9H0C2 315 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 MS4A5Q9H3V2 200 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 COA4Q9NYJ1 87 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 GNG12Q9UBI6 72 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 PSG11Q9UQ72 335 aa14.93□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ANKHD1Q8IWZ3 2542 aaKnown RBP14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TRGV10A0A0A0MS01 117 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 KBTBD11-OT1A0A1B0GTJ5 212 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TMEM178BH3BS89 294 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ST8SIA5O15466 376 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 ATG12O94817 140 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 FAM157CP0CG43 387 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 EPHA1P21709 976 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 LPAR6P43657 344 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 VAMP2P63027 116 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 SWI5Q1ZZU3 235 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 MST1LQ2TV78 715 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 DUX4L9Q6RFH8 374 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 Q6ZRM9 215 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 DEFB108BQ8NET1 73 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 NEUROG1Q92886 237 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 BSCL2Q96G97 398 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 DYNLRB1Q9NP97 96 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 CLN8Q9UBY8 286 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 CACNG5Q9UF02 275 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 MMP24Q9Y5R2 645 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 SESN1Q9Y6P5 492 aa14.92□□□□□ -0.02
HLA-DQB1-201ENST00000374943 PKDREJQ9NTG1 2253 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 BORCS7-ASMTA0A0B4J1R7 106 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 A8MXK9 166 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 DEFB108AA8MXU0 73 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 WRBO00258 174 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 CLDN1O95832 211 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 P0C879 139 aa14.91□□□□□ -0.02
HLA-DQB1-201ENST00000374943 TCF23Q7RTU1 214 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms