RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 SERF2P84101 59 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 PMP22Q01453 160 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 MZT1Q08AG7 82 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 CATR1Q13166 79 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 ICAM4Q14773 271 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 GUSBP1Q15486 140 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 TBR1Q16650 682 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 ZNF585BQ52M93 769 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 KRBOX4Q5JUW0 171 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 THNSL2Q86YJ6 484 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 ZFP82Q8N141 532 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 DRAM1Q8N682 238 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 CLDND2Q8NHS1 167 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 GALMQ96C23 342 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 RARRES2Q99969 163 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 ABHD14AQ9BUJ0 271 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 ESRP2Q9H6T0 727 aaKnown RBP11.75□□□□□ -0.53
HMGCL-203ENST00000374490 OR14J1Q9UGF5 321 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 SHANK1Q9Y566 2161 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 ATMQ13315 3056 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 LOC102723971A0A1B0GUV8 181 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 A0A1W2PPH5 198 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 AQP7O14520 342 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 IFNA17P01571 189 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 COX5AP20674 150 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 S100A12P80511 92 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 RUNX1Q01196 453 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 TMEM267Q0VDI3 215 aaPredicted RBP11.74□□□□□ -0.53
HMGCL-203ENST00000374490 PSG7Q13046 419 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 SLC35E3Q7Z769 313 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 ZNF525Q8N782 197 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 C2CD4CQ8TF44 421 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 MBD3L1Q8WWY6 194 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 PINX1Q96BK5 328 aaKnown RBP11.74□□□□□ -0.53
HMGCL-203ENST00000374490 TRIB1Q96RU8 372 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 TCEAL7Q9BRU2 100 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 C20orf24Q9BUV8 137 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 OBP2BQ9NPH6 170 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 SIRT7Q9NRC8 400 aa11.74□□□□□ -0.53
HMGCL-203ENST00000374490 PUS1Q9Y606 427 aaKnown RBP eCLIP11.74□□□□□ -0.53
HMGCL-203ENST00000374490 CXorf65A6NEN9 183 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 A6NLC8 198 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 H3BQ15 152 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 PPIHO43447 177 aaKnown RBP11.73□□□□□ -0.53
HMGCL-203ENST00000374490 OR2C1O95371 312 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 GRPP07492 148 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 ZNF16P17020 682 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-203ENST00000374490 KITLGP21583 273 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 IL2RGP31785 369 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 MEOX2P50222 304 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 HAGHQ16775 308 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 EIF2S3LQ2VIR3 472 aaKnown RBP11.73□□□□□ -0.53
HMGCL-203ENST00000374490 LRRC75BQ2VPJ9 315 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 TRAT1Q6PIZ9 186 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 Q6ZRM9 215 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 MYPOPQ86VE0 399 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-203ENST00000374490 C1QL4Q86Z23 238 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 LILRB2Q8N423 598 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 PRR18Q8N4B5 295 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 KLF14Q8TD94 323 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-203ENST00000374490 FAM216AQ8WUB2 273 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 SARAFQ96BY9 339 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 TVP23CQ96ET8 276 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 C12orf57Q99622 126 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 TIMM9Q9Y5J7 89 aa11.73□□□□□ -0.53
HMGCL-203ENST00000374490 C5orf52A6NGY3 159 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 B4DEV8 164 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 IFNL4K9M1U5 179 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 UBE2CO00762 179 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 WDR1O75083 606 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 LYZL6O75951 148 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 IFNA1P01562 189 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 IGKV3-15P01624 115 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 IAPPP10997 89 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 UBE2KP61086 200 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 ERVS71-1P61550 626 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 IGFBP7Q16270 282 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 ATP6V1FQ16864 119 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 ZNF429Q86V71 674 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 NINJ1Q92982 152 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 NIPSNAP3BQ9BS92 247 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 BCL2L14Q9BZR8 327 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 CISD1Q9NZ45 108 aaKnown RBP11.72□□□□□ -0.53
HMGCL-203ENST00000374490 METTL1Q9UBP6 276 aaKnown RBP11.72□□□□□ -0.53
HMGCL-203ENST00000374490 LAMP3Q9UQV4 416 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 ZNF407Q9C0G0 2248 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 ARHGAP21Q5T5U3 1957 aa11.72□□□□□ -0.53
HMGCL-203ENST00000374490 TRAV39A0A0B4J263 110 aa11.71□□□□□ -0.53
HMGCL-203ENST00000374490 A0A1W2PPE2 198 aa11.71□□□□□ -0.53
HMGCL-203ENST00000374490 CYSRT1A8MQ03 144 aa11.71□□□□□ -0.53
HMGCL-203ENST00000374490 H3BP45 60 aa11.71□□□□□ -0.53
HMGCL-203ENST00000374490 SMIM6P0DI80 62 aa11.71□□□□□ -0.53
HMGCL-203ENST00000374490 RPS23P62266 143 aaKnown RBP11.71□□□□□ -0.53
HMGCL-203ENST00000374490 PMS2P11Q13670 270 aa11.71□□□□□ -0.53
HMGCL-203ENST00000374490 TMEM41BQ5BJD5 291 aa11.71□□□□□ -0.53
HMGCL-203ENST00000374490 ISOC2Q96AB3 205 aa11.71□□□□□ -0.53
HMGCL-203ENST00000374490 TAAR6Q96RI8 345 aa11.71□□□□□ -0.53
HMGCL-203ENST00000374490 P2RX4Q99571 388 aa11.71□□□□□ -0.53
HMGCL-203ENST00000374490 RFNGQ9Y644 331 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms