RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SYNGR2O43760 224 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 SLC25A6P12236 298 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 MALLQ13021 153 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 VAMP3Q15836 100 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 TMEM196Q5HYL7 178 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 Q6ZS52 159 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 Q6ZSR3 168 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 SFTPA2Q8IWL1 248 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 SPSB1Q96BD6 273 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 NRN1Q9NPD7 142 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 CDC42EP3Q9UKI2 254 aa11□□□□□ -0.65
PRPF4-201ENST00000374198 IGKV1D-13A0A0B4J2D9 117 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 UBE2L5PA0A1B0GUS4 154 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 C11orf94C9JXX5 98 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 PDCD6O75340 191 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 ZNF253O75346 499 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 IGKV1-13P0DP09 117 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 DRD1P21728 446 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 RHOGP84095 191 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 PDCD1Q15116 288 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 IZUMO4Q1ZYL8 232 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 OSR2Q8N2R0 312 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 ALKBH4Q9NXW9 302 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 RBM7Q9Y580 266 aaKnown RBP10.99□□□□□ -0.65
PRPF4-201ENST00000374198 IGHV2-26A0A0B4J1V2 119 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 IGHV1-69-2A0A0G2JMI3 117 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 SLC22A20A6NK97 555 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 GDF9O60383 454 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 HNRNPA2B1P22626 353 aaKnown RBP10.99□□□□□ -0.65
PRPF4-201ENST00000374198 ASCL4Q6XD76 172 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 OR6C1Q96RD1 312 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 ZNF442Q9H7R0 627 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 CCL28Q9NRJ3 127 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 H3BML4 177 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 RAC2P15153 192 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 EGR1P18146 543 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 NSDHLQ15738 373 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 RSPO4Q2I0M5 234 aaPredicted RBP10.99□□□□□ -0.65
PRPF4-201ENST00000374198 Q6ZRM9 215 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 ZNF114Q8NC26 417 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 OR10G9Q8NGN4 311 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 OR10G7Q8NGN6 311 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 ZNF501Q96CX3 271 aaPredicted RBP10.99□□□□□ -0.65
PRPF4-201ENST00000374198 ATG2BQ96BY7 2078 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 DNAH14Q0VDD8 3507 aa10.99□□□□□ -0.65
PRPF4-201ENST00000374198 IGKV1-12A0A0C4DH73 117 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 MDFIC2A0A1B0GVS7 189 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 IGLC7A0M8Q6 106 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 OR5B21A6NL26 309 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 RNF212BA8MTL3 300 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 RBFOX2O43251 390 aaKnown RBP eCLIP10.98□□□□□ -0.65
PRPF4-201ENST00000374198 IGKV1D-12P01611 117 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 KITLGP21583 273 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 EFNA3P52797 238 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 GNB1P62873 340 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 NHLH1Q02575 133 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 MYBPHQ13203 477 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 ZIC4Q8N9L1 334 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 OR2M3Q8NG83 312 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 OR5B3Q8NH48 314 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 ST8SIA1Q92185 356 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 FAM131CQ96AQ9 280 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 CLN8Q9UBY8 286 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 A0A1W2PR80 420 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 A0A1W2PRS3 328 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 PGPEP1LA6NFU8 196 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 VSTM2BA6NLU5 285 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 PGLYRP1O75594 196 aaPredicted RBP10.98□□□□□ -0.65
PRPF4-201ENST00000374198 CXCL12P48061 93 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 SPEM1Q8N4L4 309 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 UHRF2Q96PU4 802 aa10.98□□□□□ -0.65
PRPF4-201ENST00000374198 LOC102725191A0A1B0GVB3 256 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 C2orf72A6NCS6 295 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 DPRXA6NFQ7 191 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 PDE6DO43924 150 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 NAPSAO96009 420 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 PSG4Q00888 419 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 ZNF90Q03938 601 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 SLC38A11Q08AI6 406 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 PNKDQ8N490 385 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 KLHDC7BQ96G42 594 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 DERL1Q9BUN8 251 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 WNT10AQ9GZT5 417 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 GNB4Q9HAV0 340 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 MRPL27Q9P0M9 148 aaKnown RBP10.97□□□□□ -0.65
PRPF4-201ENST00000374198 TRAV9-1A0A075B6T8 112 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 PRSS47A8MTI9 375 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 FCN1O00602 326 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 NDUFB4O95168 129 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 SP9P0CG40 484 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 F2RP25116 425 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 AMTP48728 403 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 PRRX1P54821 245 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 RSPO1Q2MKA7 263 aaPredicted RBP10.97□□□□□ -0.65
PRPF4-201ENST00000374198 CACNG5Q9UF02 275 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 CACNA1HO95180 2353 aa10.97□□□□□ -0.65
PRPF4-201ENST00000374198 TMEM238LA0A1B0GVL6 79 aa10.96□□□□□ -0.65
PRPF4-201ENST00000374198 CRYAAP02489 173 aa10.96□□□□□ -0.65
PRPF4-201ENST00000374198 SPANXN5Q5MJ07 72 aa10.96□□□□□ -0.65
PRPF4-201ENST00000374198 ARHGEF17Q96PE2 2063 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms