RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ZNF137PP52743 207 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 AMELYQ99218 206 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 ZNFX1Q9P2E3 1918 aaKnown RBP12.34□□□□□ -0.43
LMX1B-202ENST00000373474 ZNF324O75467 553 aaPredicted RBP12.34□□□□□ -0.43
LMX1B-202ENST00000373474 KBTBD11O94819 623 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 IGHV3-13P01766 116 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 IGHV3-7P01780 117 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 C21orf140B9A014 251 aa12.33□□□□□ -0.43
LMX1B-202ENST00000373474 GZMHP20718 246 aa12.33□□□□□ -0.43
LMX1B-202ENST00000373474 C1orf100Q5SVJ3 147 aa12.33□□□□□ -0.43
LMX1B-202ENST00000373474 FAM27BQ5VT28 67 aa12.33□□□□□ -0.43
LMX1B-202ENST00000373474 SSMEM1Q8WWF3 244 aa12.33□□□□□ -0.43
LMX1B-202ENST00000373474 CCL17Q92583 94 aa12.33□□□□□ -0.43
LMX1B-202ENST00000373474 ZNF501Q96CX3 271 aaPredicted RBP12.33□□□□□ -0.43
LMX1B-202ENST00000373474 KCNK17Q96T54 332 aa12.33□□□□□ -0.43
LMX1B-202ENST00000373474 FOXJ2Q9P0K8 574 aa12.33□□□□□ -0.43
LMX1B-202ENST00000373474 SOD3P08294 240 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 SMIM13P0DJ93 91 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 TEX30Q5JUR7 227 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 SFTPA2Q8IWL1 248 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 ZDHHC16Q969W1 377 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 GPR132Q9UNW8 380 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 PRRC2BQ5JSZ5 2229 aaKnown RBP12.33□□□□□ -0.44
LMX1B-202ENST00000373474 SIPA1L1O43166 1804 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 TFF2Q03403 129 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 HIKESHIQ53FT3 197 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 Q8WTZ3 238 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 CBLN4Q9NTU7 201 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 F12P00748 615 aaPredicted RBP12.33□□□□□ -0.44
LMX1B-202ENST00000373474 SMIM10L1P0DMW3 83 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 OR5R1Q8NH85 324 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 SMIM10Q96HG1 83 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 RASL11BQ9BPW5 248 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 GGACTQ9BVM4 153 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 KCNE5Q9UJ90 142 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 ZNF236Q9UL36 1845 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 TRAV38-1A0A0B4J264 116 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 TNXAQ16473 311 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 HES3Q5TGS1 186 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 OR8B3Q8NGG8 313 aa12.33□□□□□ -0.44
LMX1B-202ENST00000373474 NPIPB9F8W1W9 429 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 MRPL18Q9H0U6 180 aaKnown RBP12.32□□□□□ -0.44
LMX1B-202ENST00000373474 AGFG2O95081 481 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 LSM10Q969L4 123 aaKnown RBP12.32□□□□□ -0.44
LMX1B-202ENST00000373474 TINAGQ9UJW2 476 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 PIN1P1O15428 100 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 GNG7O60262 68 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 IL4P05112 153 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 HKR1P10072 659 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 KLRB1Q12918 225 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 SLC25A47Q6Q0C1 308 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 SMRP1Q8NCR6 262 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 TUBD1Q9UJT1 453 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 KLK10O43240 276 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 OR4A8P0C604 315 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 ZXDCQ2QGD7 858 aaPredicted RBP12.32□□□□□ -0.44
LMX1B-202ENST00000373474 NFAM1Q8NET5 270 aaPredicted RBP12.32□□□□□ -0.44
LMX1B-202ENST00000373474 SLC25A40Q8TBP6 338 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 ABHD14BQ96IU4 210 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 PCGF1Q9BSM1 259 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 ARID1BQ8NFD5 2236 aaPredicted RBP12.32□□□□□ -0.44
LMX1B-202ENST00000373474 TRIP12Q14669 1992 aaPredicted RBP12.32□□□□□ -0.44
LMX1B-202ENST00000373474 MPDU1O75352 247 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 SPEM2Q0P670 501 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 ZNF506Q5JVG8 444 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 SPANXN1Q5VSR9 72 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 WDR25Q64LD2 544 aaPredicted RBP12.32□□□□□ -0.44
LMX1B-202ENST00000373474 ZNF519Q8TB69 540 aa12.32□□□□□ -0.44
LMX1B-202ENST00000373474 LOC389332A0A1B0GUA5 103 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 NUDT3O95989 172 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 MOGAT3Q86VF5 341 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 WDR31Q8NA23 367 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 OR1K1Q8NGR3 316 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 H7C2G1 150 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 IGHMP01871 453 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 CEACAM21Q3KPI0 293 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 INO80CQ6PI98 192 aaPredicted RBP12.31□□□□□ -0.44
LMX1B-202ENST00000373474 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
LMX1B-202ENST00000373474 H0Y980 276 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 LGALS7P47929 136 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 HOXA4Q00056 320 aaPredicted RBP12.31□□□□□ -0.44
LMX1B-202ENST00000373474 NDUFS8O00217 210 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 RBFOX2O43251 390 aaKnown RBP eCLIP12.31□□□□□ -0.44
LMX1B-202ENST00000373474 IBA57Q5T440 356 aaKnown RBP12.31□□□□□ -0.44
LMX1B-202ENST00000373474 PAXXQ9BUH6 204 aa12.31□□□□□ -0.44
LMX1B-202ENST00000373474 IGHV1-45A0A0A0MS14 117 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 TMEM189A5PLL7 270 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 IL9P15248 144 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 PSG4Q00888 419 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 DEFB124Q8NES8 71 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 NUDT16L1Q9BRJ7 211 aaKnown RBP12.3□□□□□ -0.44
LMX1B-202ENST00000373474 SMOC1Q9H4F8 434 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 RNF7Q9UBF6 113 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 TRBV23-1A0A0A0MS06 115 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 TGIF2-C20orf24A0A0A6YYL0 155 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 MDP1Q86V88 176 aa12.3□□□□□ -0.44
LMX1B-202ENST00000373474 LGALS3P17931 250 aaKnown RBP12.3□□□□□ -0.44
LMX1B-202ENST00000373474 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
LMX1B-202ENST00000373474 TRIP6Q15654 476 aaKnown RBP12.3□□□□□ -0.44
LMX1B-202ENST00000373474 OR11H4Q8NGC9 324 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms