RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 FAM90A14PP0C7W9 464 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 CCNOP22674 350 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 IL12BP29460 328 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 GRPRP30550 384 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 CTXN1P60606 82 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 IL13RA2Q14627 380 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 ADIRFQ15847 76 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 EXT1Q16394 746 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 MRGPRGQ86SM5 289 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 TMEM123Q8N131 208 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 OR4P4Q8NGL7 312 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 PERPQ96FX8 193 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 KLHDC2Q9Y2U9 406 aa7.57□□□□□ -1.2
ATG4A-203ENST00000372232 ASXL3Q9C0F0 2248 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 A0A1B0GVT2 93 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 A0A1B0GX78 115 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 OR2T8A6NH00 312 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 TRAF3IP2O43734 574 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 GRPP07492 148 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 IGLC1P0CG04 106 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 AZU1P20160 251 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 KITLGP21583 273 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 RBMXP38159 391 aaKnown RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 FOXL2P58012 376 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 RPL18Q07020 188 aaKnown RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 WDR74Q6RFH5 385 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 MARCH3Q86UD3 253 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 WFDC3Q8IUB2 231 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 C5orf17Q8NAS9 161 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 TSEN15Q8WW01 171 aaKnown RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 SPSB1Q96BD6 273 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 ZNF501Q96CX3 271 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 TSSK2Q96PF2 358 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 RSG1Q9BU20 258 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 SSBP4Q9BWG4 385 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 VN1R1Q9GZP7 353 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 ZNF160Q9HCG1 818 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 RXFP3Q9NSD7 469 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 COPS7AQ9UBW8 275 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 VDAC3Q9Y277 283 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 TBL2Q9Y4P3 447 aaKnown RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 OR51B2Q9Y5P1 312 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 SDK1Q7Z5N4 2213 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 A0A1W2PQD3 144 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 C17orf51A8MQB3 221 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 IGFBP3P17936 291 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 FSTP19883 344 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 IL3RAP26951 378 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 CKS1BP61024 79 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 RPL23P62829 140 aaKnown RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 BAXQ07812 192 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 PLCXD2Q0VAA5 305 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 C1orf100Q5SVJ3 147 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 PRAMEF5Q5TYX0 476 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 PRAMEF6Q5VXH4 476 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 KCNIP4Q6PIL6 250 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 WDR82Q6UXN9 313 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 FBXL14Q8N1E6 418 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 DEFB125Q8N687 156 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 PSMF1Q92530 271 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 EMG1Q92979 244 aaKnown RBP7.56□□□□□ -1.2
ATG4A-203ENST00000372232 FAM46BQ96A09 425 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 SFRP2Q96HF1 295 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 C4orf45Q96LM5 186 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 ULBP3Q9BZM4 244 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 FGF21Q9NSA1 209 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 GNG13Q9P2W3 67 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 RHBDD3Q9Y3P4 386 aa7.56□□□□□ -1.2
ATG4A-203ENST00000372232 ADAM20O43506 726 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 NPIPB7O75200 414 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 PITX3O75364 302 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 AADACP22760 399 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 CCKBRP32239 447 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 PTGER4P35408 488 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 MFGE8Q08431 387 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-203ENST00000372232 TCTEX1D4Q5JR98 221 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 ERASQ7Z444 233 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 BCL6BQ8N143 479 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-203ENST00000372232 ZNF441Q8N8Z8 693 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 OR1B1Q8NGR6 318 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 OR2Y1Q8NGV0 311 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 MRPL24Q96A35 216 aaKnown RBP7.55□□□□□ -1.2
ATG4A-203ENST00000372232 CLDN23Q96B33 292 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 GNPNAT1Q96EK6 184 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-203ENST00000372232 TSPAN32Q96QS1 320 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 NUDT22Q9BRQ3 303 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 B3GALT5Q9Y2C3 310 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 RNF114Q9Y508 228 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 CABIN1Q9Y6J0 2220 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 NKX2-6A6NCS4 301 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 SERF1AO75920 110 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 SMIM17P0DL12 118 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 CXCL12P48061 93 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 PSG9Q00887 426 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 EWSR1Q01844 656 aaKnown RBP eCLIP7.55□□□□□ -1.2
ATG4A-203ENST00000372232 CLEC12BQ2HXU8 276 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 C1QL3Q5VWW1 255 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 NEGR1Q7Z3B1 354 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 CALHM1Q8IU99 346 aa7.55□□□□□ -1.2
ATG4A-203ENST00000372232 OR13G1Q8NGZ3 307 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms