RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 G6PC2Q9NQR9 355 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 M0R296 226 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 SRSF10O75494 262 aaKnown RBP10.17□□□□□ -0.78
PTPN1-201ENST00000371621 NAPSAO96009 420 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 SCTP09683 121 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 ROM1Q03395 351 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 SPEM2Q0P670 501 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 SPSB3Q6PJ21 355 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 DOLPP1Q86YN1 238 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 WDFY1Q8IWB7 410 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 OR8A1Q8NGG7 326 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 OR1N2Q8NGR9 330 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM140Q9NV12 185 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 ANKRD36A6QL64 1941 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 PROB1E7EW31 1015 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 S1PR2O95136 353 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 HTR1DP28221 377 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 ATP5G3P48201 142 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 FOXF1Q12946 379 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 DNLZQ5SXM8 178 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 TEX50A0A1B0GTY4 177 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 HELTA6NFD8 242 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 K7EQM0 130 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 CYR61O00622 381 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 DEGS1O15121 323 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 SOX8P57073 446 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 SRSF4Q08170 494 aaKnown RBP10.17□□□□□ -0.78
PTPN1-201ENST00000371621 FAM90A2PQ658T7 463 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 RFESDQ8TAC1 157 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 RNF186Q9NXI6 227 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 SERGEFQ9UGK8 458 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 CACNA1HO95180 2353 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 OR4C46A6NHA9 309 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 EML2O95834 649 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 HIST1H1EP10412 219 aaKnown RBP10.17□□□□□ -0.78
PTPN1-201ENST00000371621 LCN2P80188 198 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 PLAURQ03405 335 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 C5orf24Q7Z6I8 188 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 PRSS3P2Q8NHM4 247 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 BAHD1Q8TBE0 780 aaPredicted RBP10.17□□□□□ -0.78
PTPN1-201ENST00000371621 FAM60AQ9NP50 221 aa10.17□□□□□ -0.78
PTPN1-201ENST00000371621 MRPS18CQ9Y3D5 142 aaKnown RBP10.17□□□□□ -0.78
PTPN1-201ENST00000371621 SPTA1P02549 2419 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 MYO16Q9Y6X6 1858 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 BGLAPP02818 100 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 CTXN2P0C2S0 81 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 B4GALT1P15291 398 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 TSPOP30536 169 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 NTSR1P30989 418 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 GFRA1P56159 465 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 MRGPRDQ8TDS7 321 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 SGK494Q96LW2 274 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 MCRIP2Q9BUT9 160 aaKnown RBP10.16□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM147Q9BVK8 224 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 TAAR3PQ9P1P4 343 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 NCOR1O75376 2440 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM250H0YL14 139 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 PDE6DO43924 150 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 FABP2P12104 132 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 GCSHP23434 173 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 MRPL49Q13405 166 aaKnown RBP10.16□□□□□ -0.78
PTPN1-201ENST00000371621 GPR146Q96CH1 333 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM56Q96MV1 263 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 MAP1LC3CQ9BXW4 147 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 LIN7CQ9NUP9 197 aaKnown RBP10.16□□□□□ -0.78
PTPN1-201ENST00000371621 CLEC5AQ9NY25 188 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 SBF1O95248 1867 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 A0A0A6YYD4 124 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 IGLV1-36A0A0B4J1U3 117 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 LEPROTL1O95214 131 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 EGR4Q05215 589 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 EDDM3AQ14507 147 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 PSG5Q15238 335 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 C1orf174Q8IYL3 243 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.16□□□□□ -0.78
PTPN1-201ENST00000371621 DPF1Q92782 380 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 NCOR1P1Q9H4R4 102 aa10.16□□□□□ -0.78
PTPN1-201ENST00000371621 PDCD11Q14690 1871 aaKnown RBP10.15□□□□□ -0.78
PTPN1-201ENST00000371621 A0A1W2PN81 502 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 TDGF1P13385 188 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 CD38P28907 300 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 CA7P43166 264 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 GPR6P46095 362 aaPredicted RBP10.15□□□□□ -0.78
PTPN1-201ENST00000371621 MESP2Q0VG99 397 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 C19orf35Q6ZS72 473 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 Q6ZWC4 215 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 FA2HQ7L5A8 372 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 SFTPA2Q8IWL1 248 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 SP7Q8TDD2 431 aaPredicted RBP10.15□□□□□ -0.78
PTPN1-201ENST00000371621 CYYR1Q96J86 154 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 R4GN57 208 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 ANKRD30BLA7E2S9 258 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 DEFB108AA8MXU0 73 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 HYPMO75409 117 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 CNIH1O95406 144 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 C17orf99Q6UX52 265 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 PQLC2Q6ZP29 291 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 SAXO1Q8IYX7 474 aa10.15□□□□□ -0.78
PTPN1-201ENST00000371621 ZNF519Q8TB69 540 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms