RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 STXBP6Q8NFX7 210 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 WDYHV1Q96HA8 205 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 SPINK4O60575 86 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 RCC1P18754 421 aaPredicted RBP12.64□□□□□ -0.39
NDC1-201ENST00000371429 SLC24A4Q8NFF2 622 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 G6PC2Q9NQR9 355 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 MMP26Q9NRE1 261 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 SNRNP200O75643 2136 aaKnown RBP12.64□□□□□ -0.39
NDC1-201ENST00000371429 MBPP02686 304 aaPredicted RBP12.64□□□□□ -0.39
NDC1-201ENST00000371429 TPPP2P59282 170 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 RPL8P62917 257 aaKnown RBP12.64□□□□□ -0.39
NDC1-201ENST00000371429 HOXA4Q00056 320 aaPredicted RBP12.64□□□□□ -0.39
NDC1-201ENST00000371429 CFHR1Q03591 330 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 UBE2V2Q15819 145 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 VAX1Q5SQQ9 334 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 ZNF236Q9UL36 1845 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 KLF7O75840 302 aaPredicted RBP12.64□□□□□ -0.39
NDC1-201ENST00000371429 PCSK4Q6UW60 755 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 OR4D10Q8NGI6 311 aa12.64□□□□□ -0.39
NDC1-201ENST00000371429 ID1P41134 155 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 EWSR1Q01844 656 aaKnown RBP eCLIP12.63□□□□□ -0.39
NDC1-201ENST00000371429 ZNF561Q8N587 486 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 CLEC7AQ9BXN2 247 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 MRPS18CQ9Y3D5 142 aaKnown RBP12.63□□□□□ -0.39
NDC1-201ENST00000371429 DOCK6Q96HP0 2047 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 RAB5AP20339 215 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 GLIPR1P48060 266 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 MEGF10Q96KG7 1140 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 TMEM106BQ9NUM4 274 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 IGHV3OR16-10A0A075B7F0 116 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 SLC25A17O43808 307 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 MUC1P15941 1255 aaPredicted RBP12.63□□□□□ -0.39
NDC1-201ENST00000371429 GALR1P47211 349 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 RPL30P62888 115 aaKnown RBP12.63□□□□□ -0.39
NDC1-201ENST00000371429 MOGAT2Q3SYC2 334 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 TMEM88Q6PEY1 159 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 PNKDQ8N490 385 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 TCTEX1D1Q8N7M0 179 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 PHYHIPLQ96FC7 376 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 LOC102723971A0A1B0GUV8 181 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 ZNF705AQ6ZN79 300 aaPredicted RBP12.63□□□□□ -0.39
NDC1-201ENST00000371429 OR4A5Q8NH83 315 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 RNASE6Q93091 150 aaKnown RBP12.63□□□□□ -0.39
NDC1-201ENST00000371429 SLC35B3Q9H1N7 401 aa12.63□□□□□ -0.39
NDC1-201ENST00000371429 ZNF729A6NN14 1252 aaPredicted RBP12.62□□□□□ -0.39
NDC1-201ENST00000371429 HCP5Q6MZN7 132 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 RBPMS2Q6ZRY4 209 aaKnown RBP12.62□□□□□ -0.39
NDC1-201ENST00000371429 ZNF645Q8N7E2 425 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 FLVCR1-AS1Q8TAF5 88 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 NEU4Q8WWR8 484 aaPredicted RBP12.62□□□□□ -0.39
NDC1-201ENST00000371429 TTC28Q96AY4 2481 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 TRBV5-7A0A0A0MS05 114 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 NPBWR2P48146 333 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 UQCC3Q6UW78 93 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 NAT8BQ9UHF3 227 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 A0A0G2JMZ2 1700 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 LRRC37A2A6NM11 1700 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 MDC1Q14676 2089 aaKnown RBP12.62□□□□□ -0.39
NDC1-201ENST00000371429 LOC390937A0A1W2PQ73 354 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 PLA2G10O15496 165 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 C2CD4CQ8TF44 421 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 ZNF426Q9BUY5 554 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 KLF4O43474 513 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 ANKRD55Q3KP44 614 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 CLLU1Q5K131 121 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 DGAT2L7PQ6IED9 249 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 OR5P3Q8WZ94 311 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 LEAP2Q969E1 77 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 HSF4Q9ULV5 492 aa12.62□□□□□ -0.39
NDC1-201ENST00000371429 PSME4Q14997 1843 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 OPN4Q9UHM6 478 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 UFC1Q9Y3C8 167 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 CDRT15L2A8MXV6 281 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 ORM1P02763 201 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 HIST1H1EP10412 219 aaKnown RBP12.61□□□□□ -0.39
NDC1-201ENST00000371429 IGHV1-2P23083 117 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 ZNRF1Q8ND25 227 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 SCMH1Q96GD3 660 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 JPT1Q9UK76 154 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 PTPRFP10586 1907 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 ABCA4P78363 2273 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 IGHV2OR16-5A0A0B4J2B6 119 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 H0Y980 276 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 HLA-DQB1P01920 261 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 TFPI2P48307 235 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 CRYBA2P53672 197 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 ZNF273Q14593 569 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 C16orf82Q7Z2V1 217 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 C11orf42Q8N5U0 333 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 FAM168AQ92567 244 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 NOL4LQ96MY1 436 aaPredicted RBP12.61□□□□□ -0.39
NDC1-201ENST00000371429 TLNRD1Q9H1K6 362 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 MANBALQ9NQG1 85 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 CLDN34H7C241 214 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 CORTO00230 105 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 HYPMO75409 117 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 TBX6O95947 436 aaPredicted RBP12.61□□□□□ -0.39
NDC1-201ENST00000371429 THY1P04216 161 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms