RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 DYNLT3P51808 116 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 PSG7Q13046 419 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 TMEM187Q14656 261 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 TMEM42Q69YG0 159 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 MRGPRGQ86SM5 289 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 DTD1Q8TEA8 209 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 FRZBQ92765 325 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 SLC35D1Q9NTN3 355 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 GAB2Q9UQC2 676 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 AUP1Q9Y679 476 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 PHOX2AO14813 284 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 RAB29O14966 203 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 PITX3O75364 302 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 HPRT1P00492 218 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 PPP1CCP36873 323 aaKnown RBP4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 CEACAM3P40198 252 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 ETV3LQ6ZN32 361 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 UBAC2Q8NBM4 344 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 FGFBP3Q8TAT2 258 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 ABHD17AQ96GS6 310 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 OR10C1Q96KK4 312 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 OR51I2Q9H344 312 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 PRO1933Q9H354 126 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 OR5AC2Q9NZP5 309 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 JPT1Q9UK76 154 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 PRNDQ9UKY0 176 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 TECTAO75443 2155 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 TRBV23-1A0A0A0MS06 115 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 MDFIC2A0A1B0GVS7 189 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF727A8MUV8 499 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNHIT1O43257 154 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 PPIHO43447 177 aaKnown RBP4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 RPS2P15880 293 aaKnown RBP4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 BPIFB3P59826 476 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 RPL31P62899 125 aaKnown RBP4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 KLRB1Q12918 225 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 SRSF7Q16629 238 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 RSPO4Q2I0M5 234 aaPredicted RBP4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 BTNL3Q6UXE8 466 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 DPPA3Q6W0C5 159 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 LINC00469Q8N7U9 141 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 LSM10Q969L4 123 aaKnown RBP4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 RPEQ96AT9 228 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 SLC35B3Q9H1N7 401 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 PLSCR4Q9NRQ2 329 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 SLC25A10Q9UBX3 287 aaPredicted RBP4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 TMEM131Q92545 1883 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 IGHV3OR15-7A0A075B7D8 119 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 LINC00587B1AMM8 73 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 TGOLN2O43493 480 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 DKK1O94907 266 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 SCGB1D1O95968 90 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 OR4A8P0C604 315 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 PGA5P0DJD9 388 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 SLC25A6P12236 298 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 TIMP3P35625 211 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 ASCL1P50553 236 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 CCL8P80075 99 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 QRFPP83859 136 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 STUMQ69YW2 141 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 DHRS7BQ6IAN0 325 aaPredicted RBP4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 ETFRF1Q6IPR1 90 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 ACP7Q6ZNF0 438 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 MOB3BQ86TA1 216 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 OR8B3Q8NGG8 313 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 OR8B2Q96RD0 313 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 RTBDNQ9BSG5 229 aaPredicted RBP4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 ABHD14AQ9BUJ0 271 aa4.53□□□□□ -1.69
SMNDC1-202ENST00000369603 A0A0A6YYD4 124 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 CLDN14O95500 239 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 FABP4P15090 132 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 SULT1A2P50226 295 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 ADIRFQ15847 76 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 DTX1Q86Y01 620 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 SELENOHQ8IZQ5 122 aaKnown RBP4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM252Q8N6L7 170 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 OR52L2PQ8NGH6 319 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 OR1L1Q8NH94 360 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 SCNM1Q9BWG6 230 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 OR51M1Q9H341 326 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 SMDT1Q9H4I9 107 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 CLCF1Q9UBD9 225 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 WSB1Q9Y6I7 421 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 MEX3AA1L020 520 aaKnown RBP4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 MAP1LC3B2A6NCE7 125 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 CDRT15L2A8MXV6 281 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 GATCO43716 136 aaKnown RBP4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 WISP1O95388 367 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 HKR1P10072 659 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 CD40P25942 277 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 SERF2P84101 59 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 HTD2P86397 168 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 RTP5Q14D33 572 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 FFAR4Q5NUL3 377 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF818PQ6ZRF7 136 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 PIP4P1Q86T03 277 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 OR4F5Q8NH21 305 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 TVP23CQ96ET8 276 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 MEGF10Q96KG7 1140 aa4.52□□□□□ -1.69
SMNDC1-202ENST00000369603 OR4F4Q96R69 305 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms