RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 VPS25Q9BRG1 176 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 EMC6Q9BV81 110 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 SFXN3Q9BWM7 321 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 A0A0J9YW62 118 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 OR6C6A6NF89 314 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 AGPAT2O15120 278 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 TRAPPC6AO75865 159 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 SFT2D2O95562 160 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 TACSTD2P09758 323 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 SELENOVP59797 346 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 RAB11AP62491 216 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 PAFAH1B2P68402 229 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 IL13RA1P78552 427 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 C17orf67Q0P5P2 114 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 ZP4Q12836 540 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 C1orf140Q5VVS0 124 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-204ENST00000369530 Q8N976 141 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 OR5B3Q8NH48 314 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 TSEN15Q8WW01 171 aaKnown RBP5.83□□□□□ -1.48
CSDE1-204ENST00000369530 FGGYQ96C11 551 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 ELOVL1Q9BW60 279 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 EIF5A2Q9GZV4 153 aaKnown RBP5.83□□□□□ -1.48
CSDE1-204ENST00000369530 TMEM106BQ9NUM4 274 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 TRAV36DV7A0A075B6V5 113 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 IGHV1-69-2A0A0G2JMI3 117 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 A0A1W2PNR3 127 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 RNF212BA8MTL3 300 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 DEDDO75618 318 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 BGLAPP02818 100 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 ASAH2BP0C7U1 165 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 PPIAL4GP0DN37 164 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 GDF1P27539 372 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 CDKN2AP42771 156 aaKnown RBP5.82□□□□□ -1.48
CSDE1-204ENST00000369530 BIDP55957 195 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 GUCA2AQ02747 115 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 SCGB2A2Q13296 93 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 Q6ZSR3 168 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 WDR31Q8NA23 367 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 OR2V2Q96R30 315 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 FBXL17Q9UF56 701 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 G3V4G9 280 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 M0QZ24 198 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 CORTO00230 105 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 SCGNO76038 276 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 ARG2P78540 354 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 ACKR1Q16570 336 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 FAM90A2PQ658T7 463 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 RFLNBQ8N5W9 214 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 TBX15Q96SF7 602 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 NIPSNAP3BQ9BS92 247 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 MED29Q9NX70 200 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 RAB22AQ9UL26 194 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 HUWE1Q7Z6Z7 4374 aaKnown RBP5.82□□□□□ -1.48
CSDE1-204ENST00000369530 PPIAL4EA0A075B759 164 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 PPIAL4CA0A0B4J2A2 164 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 FIGNL2A6NMB9 653 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 PPIAL4DF5H284 164 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 MBPP02686 304 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-204ENST00000369530 PPIAL4FP0DN26 164 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 TNFSF4P23510 183 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 TFPI2P48307 235 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 ADAM8P78325 824 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 Q499Y3 187 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 TMEM128Q5BJH2 165 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 FAM71F2Q6NXP2 309 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 TOMM20LQ6UXN7 152 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 ST8SIA1Q92185 356 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 UQCR10Q9UDW1 63 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 LAMTOR2Q9Y2Q5 125 aa5.82□□□□□ -1.48
CSDE1-204ENST00000369530 MS4A18H0YCH9 400 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 TXNDC12O95881 172 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 AMY2AP04746 511 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 REG1AP05451 166 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 MC5RP33032 325 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 SLC17A1Q14916 467 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 MS4A18Q3C1V0 323 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 GPR157Q5UAW9 335 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 CMTM1Q8IZ96 169 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 FAM222BQ8WU58 562 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 TMEM54Q969K7 222 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 TMEM230Q96A57 120 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 RBMXL1Q96E39 390 aaKnown RBP5.81□□□□□ -1.48
CSDE1-204ENST00000369530 LINC00470Q9BZP3 86 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 SDF2L1Q9HCN8 221 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 PGPEP1Q9NXJ5 209 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 RHBDD3Q9Y3P4 386 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF407Q9C0G0 2248 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 A0A1B0GV72 72 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF736B4DX44 427 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-204ENST00000369530 H0YL77 283 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 SLC17A2O00624 439 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 CRYGSP22914 178 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 RND3P61587 244 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 P2RY6Q15077 328 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 MEP1BQ16820 701 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 PCK2Q16822 640 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 DTX2Q86UW9 622 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 LYPD6Q86Y78 171 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 FAM219AQ8IW50 185 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms