RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 VENTXO95231 258 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 DIRAS3O95661 229 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 GAPDHP04406 335 aaKnown RBP11.21□□□□□ -0.61
TPM3-211ENST00000368531 SAA2P0DJI9 122 aaPredicted RBP11.21□□□□□ -0.61
TPM3-211ENST00000368531 AADACP22760 399 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 ETV6P41212 452 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 GPR12P47775 334 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 FXYD4P59646 89 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 LY6EQ16553 131 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 TUSC1Q2TAM9 212 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 LRRC75BQ2VPJ9 315 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 RPL39P5Q59GN2 51 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 RBMXL1Q96E39 390 aaKnown RBP11.21□□□□□ -0.61
TPM3-211ENST00000368531 THAP7Q9BT49 309 aaPredicted RBP11.21□□□□□ -0.61
TPM3-211ENST00000368531 OR2D2Q9H210 308 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 ESM1Q9NQ30 184 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 PIPOXQ9P0Z9 390 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 OR2W1Q9Y3N9 320 aa11.21□□□□□ -0.61
TPM3-211ENST00000368531 IGKV1D-13A0A0B4J2D9 117 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 BTBD17A6NE02 478 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 ITGB1BP1O14713 200 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 TIMM23O14925 209 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 RAB29O14966 203 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 GSTZ1O43708 216 aaPredicted RBP11.2□□□□□ -0.62
TPM3-211ENST00000368531 CD3DP04234 171 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 IGKV1-13P0DP09 117 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 IER3P46695 156 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 LUMP51884 338 aaPredicted RBP11.2□□□□□ -0.62
TPM3-211ENST00000368531 TSPAN5P62079 268 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 SLC9A3R2Q15599 337 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 PRIMA1Q86XR5 153 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 LDLRAD3Q86YD5 345 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 TGIF2LXQ8IUE1 241 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 Q8N402 240 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 DRAM1Q8N682 238 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 ZDHHC22Q8N966 263 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 OR56B4Q8NH76 319 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 CAPSLQ8WWF8 208 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 RTN4IP1Q8WWV3 396 aaPredicted RBP11.2□□□□□ -0.62
TPM3-211ENST00000368531 ST6GALNAC6Q969X2 333 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 AGMATQ9BSE5 352 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 TINAGL1Q9GZM7 467 aaPredicted RBP11.2□□□□□ -0.62
TPM3-211ENST00000368531 TOLLIPQ9H0E2 274 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 DPAGT1Q9H3H5 408 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 PRDM13Q9H4Q3 707 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 NAV3Q8IVL0 2385 aa11.2□□□□□ -0.62
TPM3-211ENST00000368531 IGHV1-3A0A0C4DH29 117 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 A0A1W2PPI3 338 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 OOSP1A8MZH6 123 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 RAB3DO95716 219 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 IFNA6P05013 189 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 PTBP1P26599 531 aaKnown RBP eCLIP11.19□□□□□ -0.622e-9■■■■■ 36.6
TPM3-211ENST00000368531 BRS3P32247 399 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 ARHGDIBP52566 201 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 TAS2R19P59542 299 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 HILS1P60008 231 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 HERV-K104P61576 105 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 ZNF816Q0VGE8 651 aaPredicted RBP11.19□□□□□ -0.62
TPM3-211ENST00000368531 DYRK1AQ13627 763 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 RNASE10Q5GAN6 216 aaKnown RBP11.19□□□□□ -0.62
TPM3-211ENST00000368531 CCDC144NLQ6NUI1 221 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 OVCH2Q7RTZ1 564 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 TMEM229BQ8NBD8 167 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 DRAXINQ8NBI3 349 aaPredicted RBP11.19□□□□□ -0.62
TPM3-211ENST00000368531 OR6F1Q8NGZ6 308 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 SECTM1Q8WVN6 248 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 SSMEM1Q8WWF3 244 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 S1PR3Q99500 378 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 ZNF2Q9BSG1 426 aaPredicted RBP11.19□□□□□ -0.62
TPM3-211ENST00000368531 MRPL20Q9BYC9 149 aaKnown RBP11.19□□□□□ -0.62
TPM3-211ENST00000368531 SRRQ9GZT4 340 aa11.19□□□□□ -0.62
TPM3-211ENST00000368531 ANK3Q12955 4377 aaKnown RBP11.19□□□□□ -0.62
TPM3-211ENST00000368531 M0R1X1 148 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 TUSC2O75896 110 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 PPYP01298 95 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 CSF1P09603 554 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 ZNF137PP52743 207 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 LINC00205P59089 165 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 ZNF45Q02386 682 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 SSBP1Q04837 148 aaKnown RBP11.18□□□□□ -0.62
TPM3-211ENST00000368531 HES1Q14469 280 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 HNF4GQ14541 408 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 ACTBL2Q562R1 376 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 FAAP20Q6NZ36 180 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 STEAP1BQ6NZ63 245 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 GLDNQ6ZMI3 551 aaPredicted RBP11.18□□□□□ -0.62
TPM3-211ENST00000368531 ZNF833PQ6ZTB9 187 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 TMEM17Q86X19 198 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 OR8H3Q8N146 312 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 OR4D10Q8NGI6 311 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 PIFOQ8TCI5 191 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 GIMAP1Q8WWP7 306 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 ZNF251Q9BRH9 671 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 CHIAQ9BZP6 476 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 SLC5A7Q9GZV3 580 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 SDHAF2Q9NX18 166 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 TAS2R8Q9NYW2 309 aa11.18□□□□□ -0.62
TPM3-211ENST00000368531 RBMX2Q9Y388 322 aaKnown RBP11.18□□□□□ -0.62
TPM3-211ENST00000368531 VGLL3A8MV65 326 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms