RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 LOXL4Q96JB6 756 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 SCN5AQ14524 2016 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 AGFG2O95081 481 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 APCDD1LQ8NCL9 501 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 OR1L6Q8NGR2 347 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 OR5AC2Q9NZP5 309 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 SYNGR2O43760 224 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 CA11O75493 328 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 COX6A1P12074 109 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 ZNF260Q3ZCT1 412 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 VAX1Q5SQQ9 334 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 TRPM7Q96QT4 1865 aa11.5□□□□□ -0.57
PTPRK-204ENST00000368210 SPINK4O60575 86 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 RBM11P57052 281 aaKnown RBP11.49□□□□□ -0.57
PTPRK-204ENST00000368210 JOSD1Q15040 202 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-204ENST00000368210 Q1RN00 199 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 SLC25A34Q6PIV7 304 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 LYZL2Q7Z4W2 148 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 MOB3BQ86TA1 216 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 MOB3AQ96BX8 217 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 SRD5A3Q9H8P0 318 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 DICER1Q9UPY3 1922 aaKnown RBP11.49□□□□□ -0.57
PTPRK-204ENST00000368210 MTCL1Q9Y4B5 1905 aaKnown RBP11.49□□□□□ -0.57
PTPRK-204ENST00000368210 IGKV3D-11A0A0A0MRZ8 115 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 SNURFLB1AK76 121 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 RPL36A-HNRNPH2H7BZ11 118 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 PMELP40967 661 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 TRAV39A0A0B4J263 110 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 SHISA3A0PJX4 238 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 TMEM229AB2RXF0 380 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 CDS2O95674 445 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 ARL16Q0P5N6 197 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 FDX2Q6P4F2 183 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 FAM206AQ9NX38 181 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 SIP14410 1827 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 DOCK4Q8N1I0 1966 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 CHST1O43916 411 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 H2BFSP57053 126 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 LDLRAD2Q5SZI1 272 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 TMEM56Q96MV1 263 aa11.49□□□□□ -0.57
PTPRK-204ENST00000368210 OOEPA6NGQ2 149 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 NPIPB13A6NJU9 1138 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 NPIPB4C9JG80 1138 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 SLC17A3O00476 420 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 COX7A2P2O60397 106 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 CA2P00918 260 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 FGF8P55075 233 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-204ENST00000368210 TGIF1Q15583 401 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 UBTD1Q9HAC8 227 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 GNB4Q9HAV0 340 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 OR2W1Q9Y3N9 320 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 A0A1B0GWJ7 208 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 MT-ND6P03923 174 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 CT45A10P0DMU9 189 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 CSN1S1P47710 185 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-204ENST00000368210 FBLN7Q53RD9 439 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 PARLQ9H300 379 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 PRDM6Q9NQX0 595 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 FAM90A27PA6NNH2 459 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 FCGR3AP08637 254 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 GZMHP20718 246 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 GNG4P50150 75 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 C19orf48Q6RUI8 117 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 H1FOOQ8IZA3 346 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-204ENST00000368210 PDE6DO43924 150 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 BCL2P10415 239 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 GALNT14Q96FL9 552 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 HES4Q9HCC6 221 aa11.48□□□□□ -0.57
PTPRK-204ENST00000368210 SNRPCP09234 159 aaKnown RBP11.47□□□□□ -0.57
PTPRK-204ENST00000368210 OR4C12Q96R67 309 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 G6PC2Q9NQR9 355 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 EFNB1P98172 346 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 SPINK9Q5DT21 86 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 DNLZQ5SXM8 178 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 C1orf185Q5T7R7 199 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 FAM219AQ8IW50 185 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 PCGF1Q9BSM1 259 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 CDC42EP3Q9UKI2 254 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 NKX2-6A6NCS4 301 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 CTSSP25774 331 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 DYNLT3P51808 116 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 MOGAT3Q86VF5 341 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 ZNF488Q96MN9 340 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 IL36GQ9NZH8 169 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 H0YL77 283 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 GNB2P62879 340 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 CEACAM21Q3KPI0 293 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 ZNF658BQ4V348 819 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-204ENST00000368210 LAMTOR2Q9Y2Q5 125 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 NPTNQ9Y639 398 aa11.47□□□□□ -0.57
PTPRK-204ENST00000368210 IGHMP01871 453 aa11.46□□□□□ -0.57
PTPRK-204ENST00000368210 HLA-GP17693 338 aa11.46□□□□□ -0.57
PTPRK-204ENST00000368210 IER3P46695 156 aa11.46□□□□□ -0.57
PTPRK-204ENST00000368210 MRPS11P82912 194 aaKnown RBP11.46□□□□□ -0.57
PTPRK-204ENST00000368210 SLC23A3Q6PIS1 610 aa11.46□□□□□ -0.57
PTPRK-204ENST00000368210 LINC00596Q86U02 117 aa11.46□□□□□ -0.57
PTPRK-204ENST00000368210 OR4S2Q8NH73 311 aa11.46□□□□□ -0.57
PTPRK-204ENST00000368210 PRSS3P2Q8NHM4 247 aa11.46□□□□□ -0.57
PTPRK-204ENST00000368210 AQP10Q96PS8 301 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms