RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TMEM30CPA0ZSE6 113 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 PRSS29PA6NIE9 313 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 B2RBV5 119 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 BMPR1BO00238 502 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 XRCC3O43542 346 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 SPRY2O43597 315 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 ORC5O43913 435 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 HBZP02008 142 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 KRT8P05787 483 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 T-ENOLP0DO92 83 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 EPHA2P29317 976 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 NANOS2P60321 138 aaKnown RBP6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF45Q02386 682 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 IL13RA2Q14627 380 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 KISS1Q15726 138 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 DEFB135Q30KP9 77 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 Q3ZCU0 254 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 SPATS1Q496A3 300 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 TP53I3Q53FA7 332 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF343Q6P1L6 599 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 FAM131AQ6UXB0 335 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF497Q6ZNH5 498 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF833PQ6ZTB9 187 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 POC5Q8NA72 575 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 CCDC54Q8NEL0 328 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR2K2Q8NGT1 345 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR2G2Q8NGZ5 317 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 ADI1Q9BV57 179 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 Q9H521 79 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 SLA2Q9H6Q3 261 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 DIABLOQ9NR28 239 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 PEF1Q9UBV8 284 aaKnown RBP6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 APLNQ9ULZ1 77 aa6.29□□□□□ -1.4
HMGB1P39-201ENST00000366304 LRP1BQ9NZR2 4599 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 DBX1A6NMT0 343 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 GABRPO00591 440 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 GEMIN2O14893 280 aaKnown RBP6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 FKBP6O75344 327 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR2A4O95047 310 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 CA2P00918 260 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 UBCP0CG48 685 aaKnown RBP6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 DBTP11182 482 aaKnown RBP6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF20P17024 532 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 CTRB1P17538 263 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 RCC1P18754 421 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 PPP1CCP36873 323 aaKnown RBP6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 KIR2DS2P43631 304 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 KCNJ3P48549 501 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 ACTR3P61158 418 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF85Q03923 595 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 MED21Q13503 144 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 ALKBH1Q13686 389 aaKnown RBP6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 MORN2Q502X0 79 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF691Q5VV52 312 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 CTRB2Q6GPI1 263 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 ASCL4Q6XD76 172 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 GLDNQ6ZMI3 551 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 PRR18Q8N4B5 295 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR52L2PQ8NGH6 319 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 OR51A2Q8NGJ7 313 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 CACNG8Q8WXS5 425 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 MAGIXQ9H6Y5 334 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 IFT22Q9H7X7 185 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 ZNF355PQ9NSJ1 428 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 GNG12Q9UBI6 72 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 ERGIC3Q9Y282 383 aa6.28□□□□□ -1.4
HMGB1P39-201ENST00000366304 SAA2-SAA4A0A096LPE2 208 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 LOC102724200A0A096LPH7 203 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 ZNF701M0R085 212 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 SULT1C4O75897 302 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 NDUFB8O95169 186 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 CDRT1O95170 752 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 ISG15P05161 165 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 SAA2P0DJI9 122 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 CT45A6P0DMU7 189 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 CT45A5P0DMU8 189 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 CT45A7P0DMV0 189 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 BMI1P35226 326 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 BCAP31P51572 246 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 LINC00205P59089 165 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 MS4A2Q01362 244 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 TMEM267Q0VDI3 215 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 SIGIRRQ6IA17 410 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 ZNF562Q6V9R5 426 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 KCTD20Q7Z5Y7 419 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 GVQW1Q8N7I0 195 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 BVESQ8NE79 360 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 PXT1Q8NFP0 134 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR4K15Q8NH41 348 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 GRPEL2Q8TAA5 225 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 BORCS5Q969J3 196 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 IFI27L2Q9H2X8 130 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 GNG8Q9UK08 70 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 TP53TG1Q9Y2A0 90 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 DMRT1Q9Y5R6 373 aa6.27□□□□□ -1.41
HMGB1P39-201ENST00000366304 A0A1W2PP11 408 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 C2orf70A6NJV1 201 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 OR4C45A6NMZ5 311 aa6.26□□□□□ -1.41
HMGB1P39-201ENST00000366304 NOTOA8MTQ0 251 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms