RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 KIR2DS1A0A191URI9 304 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 RHBDL1O75783 438 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 IFNA2P01563 188 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 PET100P0DJ07 73 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 KIR2DS4P43632 304 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 FHITP49789 147 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 TMEM33P57088 247 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 PKIAP61925 76 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 KIR2DS1Q14954 304 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 ZNF808Q8N4W9 903 aaPredicted RBP11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 FAM24BQ8N5W8 94 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 ERGIC1Q969X5 290 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 MOB3AQ96BX8 217 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 ZNF488Q96MN9 340 aa11.69□□□□□ -0.54
CSNK1E-201ENST00000359867 DOPEY1Q5JWR5 2465 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 ROS1P08922 2347 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 CRYM-AS1A6NIL9 109 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 EREGO14944 169 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 CTXN2P0C2S0 81 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 PGA5P0DJD9 388 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 SULT1A2P50226 295 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 ZNF616Q08AN1 781 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 NEK7Q8TDX7 302 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 TOMM40LQ969M1 308 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 C1orf123Q9NWV4 160 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 CD5P06127 495 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 S100A2P29034 98 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 GCH1P30793 250 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 CDX1P47902 265 aaPredicted RBP11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 ZNF154Q13106 437 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 AARDQ4LEZ3 155 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 TMEM268Q5VZI3 342 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 CXXC4Q9H2H0 198 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 GAR1Q9NY12 217 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 KCNIP3Q9Y2W7 256 aa11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 UTP20O75691 2785 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-201ENST00000359867 LRRK2Q5S007 2527 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 TRAV24A0A0B4J272 114 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 TRDCB7Z8K6 153 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 DEGS1O15121 323 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 DUSP1P28562 367 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 MDH2P40926 338 aaKnown RBP11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 GGNBP1Q5YKI7 109 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 Q6P435 159 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 CACFD1Q9UGQ2 172 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 ATP23Q9Y6H3 246 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 FAM157AC9JC47 383 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 DIRAS3O95661 229 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 IFNA10P01566 189 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 ARG1P05089 322 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 HERV-K104P61576 105 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 MIDNQ504T8 468 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 LBHQ53QV2 105 aaPredicted RBP11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 PDZD11Q5EBL8 140 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 ZNF880Q6PDB4 577 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 SYT3Q9BQG1 590 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 SIRT7Q9NRC8 400 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 PLCE1Q9P212 2302 aa11.67□□□□□ -0.54
CSNK1E-201ENST00000359867 TSTD3H0UI37 97 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 C19orf84I3L1E1 186 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 M0R036 132 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 TIMM8AO60220 97 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 NDUFA6P56556 154 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 SRSF1Q07955 248 aaKnown RBP eCLIP11.66□□□□□ -0.541e-6■□□□□ 11.3
CSNK1E-201ENST00000359867 MZT1Q08AG7 82 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 COTL1Q14019 142 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 ZNF146Q15072 292 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 ABCA11PQ4W5N1 156 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 AWAT1Q58HT5 328 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 SPIN3Q5JUX0 258 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 EIF5AL1Q6IS14 154 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 SPNS3Q6ZMD2 512 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 MRPL30Q8TCC3 161 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 GALNT14Q96FL9 552 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 H0YL77 283 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 CDIPTO14735 213 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 HS3ST1O14792 307 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 MLNRO43193 412 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 TSPAN15O95858 294 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 TK1P04183 234 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 CD40P25942 277 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 DVL1P1P54792 670 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 PIGPP57054 158 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 FXYD4P59646 89 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 NHLH2Q02577 135 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 GFI1BQ5VTD9 330 aa11.66□□□□□ -0.54
CSNK1E-201ENST00000359867 DPRXA6NFQ7 191 aa11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 DEDDO75618 318 aa11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 PPYP01298 95 aa11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 GRPP07492 148 aa11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 EIF5AP63241 154 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 BSPH1Q075Z2 132 aa11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 FAM185AQ8N0U4 392 aa11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 CCDC71LQ8N9Z2 235 aa11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 RDH5Q92781 318 aa11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 EIF5A2Q9GZV4 153 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 NAA60Q9H7X0 242 aa11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 HES4Q9HCC6 221 aa11.65□□□□□ -0.54
CSNK1E-201ENST00000359867 PARP11Q9NR21 331 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms