RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ZNF273Q14593 569 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 KCTD9Q7L273 389 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 TBC1D26Q86UD7 250 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 LDLRAD3Q86YD5 345 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 ZBTB34Q8NCN2 500 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 OR5M8Q8NGP6 311 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 RAB39BQ96DA2 213 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 DMRTB1Q96MA1 342 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 LINC00574Q9H8X3 128 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 GFOD1Q9NXC2 390 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 C3orf85A0A1B0GTC6 90 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 DBX1A6NMT0 343 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 ITGB1BP1O14713 200 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 HLA-GP17693 338 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 ATP5J2P56134 94 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 LOXL3P58215 753 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 RAP2BP61225 183 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 SRPXP78539 464 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 ANKRD55Q3KP44 614 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 MORN2Q502X0 79 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 LY6G6FQ5SQ64 297 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 ZNF645Q8N7E2 425 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 OR52M1Q8NGK5 317 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 CHIAQ9BZP6 476 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 OR2D2Q9H210 308 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 PATZ1Q9HBE1 687 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 RAB18Q9NP72 206 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 VPS13CQ709C8 3753 aa11.41□□□□□ -0.58
PDLIM5-203ENST00000359265 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 A0A1W2PPH5 198 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 RNF212BA8MTL3 300 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 F5H0A9 414 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 H0Y980 276 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 PHF1O43189 567 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 B3GALNT1O75752 331 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 OR2A4O95047 310 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 IGHV4-39P01824 125 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 C1QBP02746 253 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 WNT2P09544 360 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 OMGP23515 440 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 NFYBP25208 207 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 PDLIM4P50479 330 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 RAB7AP51149 207 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 TMEM187Q14656 261 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 C2orf68Q2NKX9 166 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 PRAMEF5Q5TYX0 476 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 TMEM200BQ69YZ2 307 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 GSG1LQ6UXU4 331 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 ZNF841Q6ZN19 808 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 LIAT1Q6ZQX7 453 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 LGI3Q8N145 548 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 DRAM1Q8N682 238 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 OR2A7Q96R45 310 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 PDCD10Q9BUL8 212 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 GSX2Q9BZM3 304 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 PRR13Q9NZ81 148 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 PSG11Q9UQ72 335 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 USF3Q68DE3 2245 aa11.4□□□□□ -0.58
PDLIM5-203ENST00000359265 PIGBOS1A0A0B4J2F0 54 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 NDUFS8O00217 210 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 CCSO14618 274 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 ST8SIA5O15466 376 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 TNFSF12O43508 249 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 PGLYRP1O75594 196 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 SIX6O95475 246 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 CCL3L1P16619 93 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 DNASE1P24855 282 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 GNB2P62879 340 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 AKAP6Q13023 2319 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 CATR1Q13166 79 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 DCAF12L2Q5VW00 463 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 WDR25Q64LD2 544 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 FAM53AQ6NSI3 398 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 HEPN1Q6WQI6 88 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 LRTM2Q8N967 370 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 C8orf46Q8TAG6 207 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 TP53RKQ96S44 253 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 FOXC2Q99958 501 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 ABHD14AQ9BUJ0 271 aa11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 METTL8Q9H825 291 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 LIN7CQ9NUP9 197 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 BEX4Q9NWD9 120 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 RPUSD1Q9UJJ7 312 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-203ENST00000359265 NSD1Q96L73 2696 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 C5orf51A6NDU8 294 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 FAM25EA8MYX2 175 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 IFNA21P01568 189 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 IGLV2-14P01704 120 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 FOSL1P15407 271 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 F2RP25116 425 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 UCP1P25874 307 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 GPR12P47775 334 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 H2BFSP57053 126 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 DSCR9P59020 149 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 SRSF4Q08170 494 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 C11orf91Q3C1V1 193 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 SP6Q3SY56 376 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 Q3ZCU0 254 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 ESCO2Q56NI9 601 aa11.38□□□□□ -0.59
PDLIM5-203ENST00000359265 CLEC2AQ6UVW9 174 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms