RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 LINC01587Q99440 93 aa7.71□□□□□ -1.18
CTNND1-201ENST00000358694 IFNL4K9M1U5 179 aa7.71□□□□□ -1.18
CTNND1-201ENST00000358694 SLC25A17O43808 307 aa7.71□□□□□ -1.18
CTNND1-201ENST00000358694 LEPROTL1O95214 131 aa7.71□□□□□ -1.18
CTNND1-201ENST00000358694 NAT2P11245 290 aa7.71□□□□□ -1.18
CTNND1-201ENST00000358694 EFNB2P52799 333 aa7.71□□□□□ -1.18
CTNND1-201ENST00000358694 UCP2P55851 309 aa7.71□□□□□ -1.18
CTNND1-201ENST00000358694 MEF2CQ06413 473 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-201ENST00000358694 ANKRD20A5PA0PJZ0 165 aa7.71□□□□□ -1.18
CTNND1-201ENST00000358694 TRGV3P03979 118 aa7.71□□□□□ -1.18
CTNND1-201ENST00000358694 ZNF430Q9H8G1 570 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-201ENST00000358694 MYH2Q9UKX2 1941 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 TRBV20OR9-2A0A075B6H5 130 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 CYB5R3P00387 301 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-201ENST00000358694 FGF5P12034 268 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 ZNF418Q8TF45 676 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-201ENST00000358694 SH3BGRL3Q9H299 93 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 MRM2Q9UI43 246 aaKnown RBP7.7□□□□□ -1.18
CTNND1-201ENST00000358694 KCNE1BA0A087WTH5 132 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 TRAV21A0A0B4J279 112 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 IGHV3-35A0A0C4DH35 117 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 A0A1W2PQM1 296 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 FOXH1O75593 365 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 REG1AP05451 166 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 FTH1P19P0C7X4 201 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 LIFP15018 202 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 IGHV3OR16-13A0A075B7E8 117 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 IGHV3-74A0A0B4J1X5 117 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 FOXI3A8MTJ6 420 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-201ENST00000358694 NDUFA2O43678 99 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 MGAT2Q10469 447 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 MESTQ5EB52 335 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 FAM209BQ5JX69 171 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 HSPB9Q9BQS6 159 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 TMEFF2Q9UIK5 374 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-201ENST00000358694 A0A1W2PQD3 144 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 CD69Q07108 199 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 NRN1LQ496H8 165 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 ZNF506Q5JVG8 444 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 FAM169BQ8N8A8 192 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 RNF133Q8WVZ7 376 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 MYH7P12883 1935 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 MOSPD3O75425 235 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 MVDP53602 400 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 C12orf54Q6X4T0 127 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 C17orf47Q8NEP4 570 aa7.7□□□□□ -1.18
CTNND1-201ENST00000358694 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-201ENST00000358694 IGHV3-66A0A0C4DH42 116 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 H3BTX0 84 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 NDUFB4O95168 129 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 MPV17P39210 176 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 RAE1P78406 368 aaKnown RBP7.69□□□□□ -1.18
CTNND1-201ENST00000358694 P2RY6Q15077 328 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 C1QL3Q5VWW1 255 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 ABHD12Q8N2K0 398 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 FAM60AQ9NP50 221 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 IDI2-AS1Q9NZ38 188 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 FRRS1LQ9P0K9 344 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 C7orf77A4D0Y5 90 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 LINC01555Q8NAE3 123 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 CITED2Q99967 270 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-201ENST00000358694 AKIP1Q9NQ31 210 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 TMEM160Q9NX00 188 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 COL16A1Q07092 1604 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-201ENST00000358694 FMN2Q9NZ56 1722 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 LINC00862A6NCI5 91 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 CDS2O95674 445 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 PKIAP61925 76 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 FXYD3Q14802 87 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 CLPPQ16740 277 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-201ENST00000358694 FAM214BQ7L5A3 538 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 RBKSQ9H477 322 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 NEU3Q9UQ49 428 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 MYH3P11055 1940 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 NPIPB11E5RHQ5 1161 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 PROB1E7EW31 1015 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 NKX2-8O15522 239 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 HOXB3P14651 431 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-201ENST00000358694 CTSSP25774 331 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 RNASEH2CQ8TDP1 164 aaKnown RBP7.69□□□□□ -1.18
CTNND1-201ENST00000358694 MRPS18BQ9Y676 258 aaKnown RBP7.69□□□□□ -1.18
CTNND1-201ENST00000358694 IFT172Q9UG01 1749 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 C1QTNF9BB2RNN3 333 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 IGHV3-23P01764 117 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 AMY1AP04745 511 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 CRHP06850 196 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 GALP22466 123 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 FGF9P31371 208 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-201ENST00000358694 ISXQ2M1V0 245 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 PNKDQ8N490 385 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 OR10S1Q8NGN2 331 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 TMEM106BQ9NUM4 274 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 MRPL16Q9NX20 251 aaKnown RBP7.69□□□□□ -1.18
CTNND1-201ENST00000358694 CALYQ9NYX4 217 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 KCNE5Q9UJ90 142 aa7.69□□□□□ -1.18
CTNND1-201ENST00000358694 IGKV3D-20A0A0C4DH25 116 aa7.68□□□□□ -1.18
CTNND1-201ENST00000358694 MDKP21741 143 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-201ENST00000358694 PQLC2Q6ZP29 291 aa7.68□□□□□ -1.18
CTNND1-201ENST00000358694 MZB1Q8WU39 189 aa7.68□□□□□ -1.18
CTNND1-201ENST00000358694 TNFRSF12AQ9NP84 129 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms