RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ADAMTSL1Q8N6G6 1762 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 OR2A4O95047 310 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 SELENOPP49908 381 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 TRA2AQ13595 282 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD3-202ENST00000358181 MRM1Q6IN84 353 aaKnown RBP8.52□□□□□ -1.05
CHD3-202ENST00000358181 ZNF770Q6IQ21 691 aaPredicted RBP8.52□□□□□ -1.05
CHD3-202ENST00000358181 STPG3Q8N7X2 389 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 GALNT14Q96FL9 552 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 ZNF48Q96MX3 618 aaPredicted RBP8.52□□□□□ -1.05
CHD3-202ENST00000358181 OR2A7Q96R45 310 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 RBKSQ9H477 322 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 PCM1Q15154 2024 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 CEACAM5P06731 702 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 MVDP53602 400 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 MFAP2P55001 183 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 OR10AG1Q8NH19 301 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 GMPPAQ96IJ6 420 aaPredicted RBP8.52□□□□□ -1.05
CHD3-202ENST00000358181 PDFQ9HBH1 243 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 TCRBV5S1A1TA0A578 114 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 PGA4P0DJD7 388 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 PGA3P0DJD8 388 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 PGA5P0DJD9 388 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 FOXL2P58012 376 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 ASAH1Q13510 395 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 TMEM92Q6UXU6 159 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 TMEM136Q6ZRR5 245 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 OR5AU1Q8NGC0 362 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 MRAPQ8TCY5 172 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 MCM3APO60318 1980 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 HMX2A2RU54 273 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 TRDCB7Z8K6 153 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 K7N7A8 449 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 SYNGR1O43759 233 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 MMP9P14780 707 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 TMEM252Q8N6L7 170 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 KIR2DL4Q99706 377 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 PRNDQ9UKY0 176 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 CACNA1CQ13936 2221 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 PPIAL4CA0A0B4J2A2 164 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 ZIC3O60481 467 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 PPIAL4GP0DN37 164 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 TSPAN7P41732 249 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 OR2V2Q96R30 315 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 COL25A1Q9BXS0 654 aaPredicted RBP8.51□□□□□ -1.05
CHD3-202ENST00000358181 TBX21Q9UL17 535 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 IGHV3-64A0A075B6Q5 118 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 LMO7DNF2Z398 122 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 CTSDP07339 412 aaPredicted RBP8.51□□□□□ -1.05
CHD3-202ENST00000358181 PRB4P10163 310 aaPredicted RBP8.51□□□□□ -1.05
CHD3-202ENST00000358181 NCMAPQ5T1S8 102 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 NANOGP1Q8N7R0 232 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 LSM10Q969L4 123 aaKnown RBP8.51□□□□□ -1.05
CHD3-202ENST00000358181 MANBALQ9NQG1 85 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 JKAMPQ9P055 326 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 CLDN34H7C241 214 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 BCL2L11O43521 198 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 COL9A1P20849 921 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 GFI1BQ5VTD9 330 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 LINC01465Q8N7H1 131 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 MRGPRFQ96AM1 343 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 DOCK2Q92608 1830 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 KNL1Q8NG31 2342 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 EREGO14944 169 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 MRGPRGQ86SM5 289 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 OR4D5Q8NGN0 318 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 POLR2AP24928 1970 aaKnown RBP8.51□□□□□ -1.05
CHD3-202ENST00000358181 SAP30O75446 220 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 NDUFA3O95167 84 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 BAP18Q8IXM2 172 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 SHISA5Q8N114 240 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 IL20Q9NYY1 176 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 OPN4Q9UHM6 478 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 TRPM3Q9HCF6 1732 aaPredicted RBP8.51□□□□□ -1.05
CHD3-202ENST00000358181 LEUTXA8MZ59 168 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 EPPINO95925 133 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 ZNF506Q5JVG8 444 aa8.51□□□□□ -1.05
CHD3-202ENST00000358181 PSG2P11465 335 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 NPPCP23582 126 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 ERVK11-1P61568 191 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 PIGYQ3MUY2 71 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 C18orf15Q96N68 181 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 METRNQ9UJH8 293 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 GLI3P10071 1580 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 J3QW42 95 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 CDC20Q12834 499 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 C12orf54Q6X4T0 127 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 GAPTQ8N292 157 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 MRPL16Q9NX20 251 aaKnown RBP8.5□□□□□ -1.05
CHD3-202ENST00000358181 OR4C45A6NMZ5 311 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 EIF3GO75821 320 aaKnown RBP eCLIP8.5□□□□□ -1.05
CHD3-202ENST00000358181 HBBP68871 147 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 BAK1Q16611 211 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 PNKDQ8N490 385 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 CMC2Q9NRP2 79 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 SFTA2Q6UW10 78 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 GVQW1Q8N7I0 195 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 SCN2AQ99250 2005 aa8.5□□□□□ -1.05
CHD3-202ENST00000358181 ELOA3CA0A087WX78 387 aaPredicted RBP8.5□□□□□ -1.05
CHD3-202ENST00000358181 IL13RA2Q14627 380 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms