RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 C5orf17Q8NAS9 161 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 PRR22Q8IZ63 422 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 NEU1Q99519 415 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 FOXJ2Q9P0K8 574 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 ODAMA1E959 279 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 MYADML2A6NDP7 307 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 RAB29O14966 203 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 ATP5LO75964 103 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CAPZBP47756 277 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 PRRX1P54821 245 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 THAP3Q8WTV1 239 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 RAB1CQ92928 201 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 PYGO2Q9BRQ0 406 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CFHR5Q9BXR6 569 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 GCM1Q9NP62 436 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 RCL1Q9Y2P8 373 aaKnown RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CFIP05156 583 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CCL20P78556 96 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CCL7P80098 99 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 MGAT2Q10469 447 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 WDR54Q9H977 334 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 FGF22Q9HCT0 170 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 IL36BQ9NZH7 164 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 ALOX12BO75342 701 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 SRSF10O75494 262 aaKnown RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 AMY1AP04745 511 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 FABP2P12104 132 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 TCTN1Q2MV58 587 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 GNRHR2Q96P88 292 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 GPR27Q9NS67 375 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CHEK1O14757 476 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CHRNB4P30926 498 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 OR3A4PP47883 348 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 SLC7A10Q9NS82 523 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 ABHD5Q8WTS1 349 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 C8orf44Q96CB5 159 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 OR1A1Q9P1Q5 309 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 C9JCJ5 164 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 PRR19A6NJB7 356 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 HS3ST1O14792 307 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 PARM1Q6UWI2 310 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 NUDT10Q8NFP7 164 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 C1QTNF6Q9BXI9 259 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 FREM1Q5H8C1 2179 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 ABCA4P78363 2273 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 TCF21O43680 179 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 OR4X2Q8NGF9 303 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 APOA2P02652 100 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 MFAP2P55001 183 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 WDR25Q64LD2 544 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-204ENST00000358025 SELENOHQ8IZQ5 122 aaKnown RBP3.56□□□□□ -1.84
SYNE2-204ENST00000358025 RNF151Q2KHN1 245 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 LINC01551Q86U37 167 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 H0YIZ8 118 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 TMPRSS2O15393 492 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 ITGBL1O95965 494 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-204ENST00000358025 CSRP1P21291 193 aaKnown RBP3.56□□□□□ -1.84
SYNE2-204ENST00000358025 PLAC9Q5JTB6 97 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 OR11L1Q8NGX0 322 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 COPS9Q8WXC6 57 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 SPTY2D1-AS1A0A0U1RR47 76 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 CDKN1BP46527 198 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 CYB561P49447 251 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 NMSQ5H8A3 153 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF664Q8N3J9 261 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 OR51B2Q9Y5P1 312 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 PROB1E7EW31 1015 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 C10orf128Q5T292 105 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 PXMP4Q9Y6I8 212 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 EML2O95834 649 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 FOXB1Q99853 325 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 PPP1R3CQ9UQK1 317 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 K7EP13 123 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 BPIFA4PQ86YQ2 179 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 NUDT22Q9BRQ3 303 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 LAMTOR2Q9Y2Q5 125 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 B4E171 279 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 SNCGO76070 127 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 SRD5A2P31213 254 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 C6orf201Q7Z4U5 140 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 AMER3Q8N944 861 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 OR1N2Q8NGR9 330 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 FER1L6-AS2Q96M78 137 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 NOTCH3Q9UM47 2321 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 UBE2L5PA0A1B0GUS4 154 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 J3QT63 122 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 CD46P15529 392 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 FAHP16930 419 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 GCH1P30793 250 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 TLE1Q04724 770 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 SCGB2A2Q13296 93 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM251Q8N6I4 163 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM54Q969K7 222 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 RSG1Q9BU20 258 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 PAM16Q9Y3D7 125 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 FOXS1O43638 330 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 DRD3P35462 400 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 NNATQ16517 81 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 COX7A2P2O60397 106 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 PLP1P60201 277 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms