RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 NUBP1P53384 320 aa13.95□□□□□ -0.18
RXRA-201ENST00000356384 ERVFRD-1P60508 538 aa13.95□□□□□ -0.18
RXRA-201ENST00000356384 IGHV5-10-1A0A0J9YXX1 117 aa13.95□□□□□ -0.18
RXRA-201ENST00000356384 NUDT3O95989 172 aa13.95□□□□□ -0.18
RXRA-201ENST00000356384 ABHD14BQ96IU4 210 aa13.95□□□□□ -0.18
RXRA-201ENST00000356384 GUCD1Q96NT3 240 aa13.95□□□□□ -0.18
RXRA-201ENST00000356384 NUP205Q92621 2012 aa13.95□□□□□ -0.18
RXRA-201ENST00000356384 LINC00862A6NCI5 91 aa13.95□□□□□ -0.18
RXRA-201ENST00000356384 HIST1H4GQ99525 98 aa13.95□□□□□ -0.18
RXRA-201ENST00000356384 NUDT16L1Q9BRJ7 211 aaKnown RBP13.95□□□□□ -0.18
RXRA-201ENST00000356384 MRPS18BQ9Y676 258 aaKnown RBP13.95□□□□□ -0.18
RXRA-201ENST00000356384 ARID1AO14497 2285 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 LINC00869P0C866 280 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 DDB2Q92466 427 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 TMEM91Q6ZNR0 172 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 BHLHA9Q7RTU4 235 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 GGTLC2Q14390 218 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 ZNF345Q14585 488 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 METTL1Q9UBP6 276 aaKnown RBP13.94□□□□□ -0.18
RXRA-201ENST00000356384 EVPLQ92817 2033 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 ZNHIT1O43257 154 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 OTX1P32242 354 aaPredicted RBP13.94□□□□□ -0.18
RXRA-201ENST00000356384 EMP1P54849 157 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 C9orf40Q8IXQ3 194 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 CYB5R3P00387 301 aaPredicted RBP13.94□□□□□ -0.18
RXRA-201ENST00000356384 MUC1P15941 1255 aaPredicted RBP13.94□□□□□ -0.18
RXRA-201ENST00000356384 SF3B6Q9Y3B4 125 aaKnown RBP13.94□□□□□ -0.18
RXRA-201ENST00000356384 ZNF831Q5JPB2 1677 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 PAPPA2Q9BXP8 1791 aa13.94□□□□□ -0.18
RXRA-201ENST00000356384 ADRA2AP08913 450 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 DCAF10Q5QP82 559 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 WDR25Q64LD2 544 aaPredicted RBP13.93□□□□□ -0.18
RXRA-201ENST00000356384 ZPLD1Q8TCW7 415 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 PGLYRP4Q96LB8 373 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 MMP16P51512 607 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 SERF2P84101 59 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 CALHM1Q8IU99 346 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 LRRC3BQ96PB8 259 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 TUBGCP6Q96RT7 1819 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 PGPA6NDG6 321 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 GAPDHP04406 335 aaKnown RBP13.93□□□□□ -0.18
RXRA-201ENST00000356384 LGALS3P17931 250 aaKnown RBP13.93□□□□□ -0.18
RXRA-201ENST00000356384 TTTY12Q9BZ98 90 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 IGKV3OR2-268A0A0C4DH90 116 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 TRGC2P03986 189 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 LSM10Q969L4 123 aaKnown RBP13.93□□□□□ -0.18
RXRA-201ENST00000356384 KLHDC2Q9Y2U9 406 aa13.93□□□□□ -0.18
RXRA-201ENST00000356384 UPK3AO75631 287 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 OR4B1Q8NGF8 309 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 OR5AC2Q9NZP5 309 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 SLC25A53Q5H9E4 307 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 FADS6Q8N9I5 356 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 PLAC1Q9HBJ0 212 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 TMEM56-RWDD3S4R434 201 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 ID4P47928 161 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 ZNF79Q15937 498 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 A0A1W2PS18 150 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 PRSS23O95084 383 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 SBF2Q86WG5 1849 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 DLEC1Q9Y238 1755 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 RBFOX2O43251 390 aaKnown RBP eCLIP13.92□□□□□ -0.182e-9■■□□□ 12.8
RXRA-201ENST00000356384 FAM106CPP0CH98 169 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 ISXQ2M1V0 245 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 NRIP2Q9BQI9 281 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 ST6GALNAC2Q9UJ37 374 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 DTX4Q9Y2E6 619 aa13.92□□□□□ -0.18
RXRA-201ENST00000356384 ZNF385CQ66K41 422 aaPredicted RBP13.91□□□□□ -0.18
RXRA-201ENST00000356384 PRSS27Q9BQR3 290 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 PHLDA3Q9Y5J5 127 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 MGST3O14880 152 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 LMX1BO60663 402 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 LEPROTL1O95214 131 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 MT-ND6P03923 174 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 MEIG1Q5JSS6 88 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 DCAF12L2Q5VW00 463 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 OPN3Q9H1Y3 402 aaPredicted RBP13.91□□□□□ -0.18
RXRA-201ENST00000356384 F11RQ9Y624 299 aaKnown RBP13.91□□□□□ -0.18
RXRA-201ENST00000356384 KLK2P20151 261 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 NANOS3P60323 173 aaKnown RBP13.91□□□□□ -0.18
RXRA-201ENST00000356384 KLRB1Q12918 225 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 KLK15Q9H2R5 256 aa13.91□□□□□ -0.18
RXRA-201ENST00000356384 FCGR2BP31994 310 aaPredicted RBP13.9□□□□□ -0.18
RXRA-201ENST00000356384 GCSAMLQ5JQS6 135 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 CLEC2AQ6UVW9 174 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 MARS2Q96GW9 593 aaKnown RBP13.9□□□□□ -0.18
RXRA-201ENST00000356384 NEU1Q99519 415 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 VSIG10L2P0DP72 767 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 PLPPR5Q32ZL2 321 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 C1orf185Q5T7R7 199 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 UNQ5815/PRO19632Q6UWF5 114 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 PQLC2Q6ZP29 291 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 TMEM252Q8N6L7 170 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 C1QL1O75973 258 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 PPP1R17O96001 155 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 FAM131CQ96AQ9 280 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 RBKSQ9H477 322 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 MAP1LC3AQ9H492 121 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 KCNK7Q9Y2U2 307 aa13.9□□□□□ -0.18
RXRA-201ENST00000356384 ATXN7O15265 892 aaPredicted RBP13.9□□□□□ -0.18
RXRA-201ENST00000356384 FOXL2P58012 376 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms