RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 HSPB8Q9UJY1 196 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 PPIAL4CA0A0B4J2A2 164 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 AP4M1O00189 453 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 PLA2G10O15496 165 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 PPIAL4GP0DN37 164 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 SMAGPQ0VAQ4 97 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 IDI2-AS1Q9NZ38 188 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 SEC11BP0C7V7 166 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 LY6EQ16553 131 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 H0Y980 276 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 HOXB1P14653 301 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-202ENST00000355480 RGP1Q92546 391 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-202ENST00000355480 ADIPOR1Q96A54 375 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 ZNF638Q14966 1978 aaKnown RBP15.55■□□□□ 0.08
COL18A1-202ENST00000355480 ELOA3CA0A087WX78 387 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-202ENST00000355480 CGB1A6NKQ9 187 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 LIMS1P48059 325 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 NCMAPQ5T1S8 102 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 C7orf77A4D0Y5 90 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 TMEM189A5PLL7 270 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 ARF6P62330 175 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 SIRT7Q9NRC8 400 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 KLF7O75840 302 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-202ENST00000355480 LINC00869P0C866 280 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 OR5AU1Q8NGC0 362 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 AMELYQ99218 206 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 CALYQ9NYX4 217 aa15.55■□□□□ 0.08
COL18A1-202ENST00000355480 M0R3E3 92 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 RHOVQ96L33 236 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 SFXN3Q9BWM7 321 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 LOC389332A0A1B0GUA5 103 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 MIOXQ9UGB7 285 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 PITPNC1Q9UKF7 332 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 FAM74A7A6NL05 159 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 PLAUP00749 431 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 CD1AP06126 327 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 SNAI3Q3KNW1 292 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 DPPA3Q6W0C5 159 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 STPG3Q8N7X2 389 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 SIPA1L3O60292 1781 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-202ENST00000355480 IGKV3D-15A0A087WSY6 115 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 hCG_38984A0A1B0GV85 526 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 ODAMA1E959 279 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 IGKV3-15P01624 115 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 C9orf62Q8N4C0 152 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 KLF14Q8TD94 323 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-202ENST00000355480 DDB2Q92466 427 aa15.54■□□□□ 0.08
COL18A1-202ENST00000355480 SHANK3Q9BYB0 1731 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 DLL1O00548 723 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 RCC1P18754 421 aaPredicted RBP15.53■□□□□ 0.08
COL18A1-202ENST00000355480 MAS1LP35410 378 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 RUNX1Q01196 453 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 LGALSLQ3ZCW2 172 aaPredicted RBP15.53■□□□□ 0.08
COL18A1-202ENST00000355480 WNT9BO14905 357 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 SLC25A17O43808 307 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 VAX1Q5SQQ9 334 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 SRXN1Q9BYN0 137 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 FOXJ2Q9P0K8 574 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 KCNAB3O43448 404 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 FUT5Q11128 374 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 ZCCHC14Q8WYQ9 949 aaKnown RBP15.53■□□□□ 0.08
COL18A1-202ENST00000355480 CCL19Q99731 98 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 TMEM56-RWDD3S4R434 201 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 UBE2L6O14933 153 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 HOXA6P31267 233 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 PCOLCEQ15113 449 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 ZNF79Q15937 498 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 CBLN2Q8IUK8 224 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 GREM1O60565 184 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 KLRB1Q12918 225 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 PCSK4Q6UW60 755 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 SYT8Q8NBV8 401 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 MIEN1Q9BRT3 115 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 IL36RNQ9UBH0 155 aa15.53■□□□□ 0.08
COL18A1-202ENST00000355480 LOC105371242A0A075B767 164 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 IGLV1-36A0A0B4J1U3 117 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 TRAV20A0A0B4J274 112 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 LOC101059948A0A1B0GTJ6 334 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 CD300CQ08708 224 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 PKIBQ9C010 78 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 ADAMTSL1Q8N6G6 1762 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 ZNF207O43670 478 aaKnown RBP15.52■□□□□ 0.08
COL18A1-202ENST00000355480 CTSBP07858 339 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 PDLIM4P50479 330 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 C19orf54Q5BKX5 351 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 LAMTOR1Q6IAA8 161 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 WDFY1Q8IWB7 410 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 TLNRD1Q9H1K6 362 aa15.52■□□□□ 0.08
COL18A1-202ENST00000355480 SELENOTP62341 195 aa15.52■□□□□ 0.07
COL18A1-202ENST00000355480 AMMECR1LQ6DCA0 310 aa15.52■□□□□ 0.07
COL18A1-202ENST00000355480 ABHD12Q8N2K0 398 aa15.52■□□□□ 0.07
COL18A1-202ENST00000355480 OR1N2Q8NGR9 330 aa15.52■□□□□ 0.07
COL18A1-202ENST00000355480 FAM106AQ4KMX7 169 aa15.52■□□□□ 0.07
COL18A1-202ENST00000355480 OR4B1Q8NGF8 309 aa15.52■□□□□ 0.07
COL18A1-202ENST00000355480 DLL3Q9NYJ7 618 aa15.52■□□□□ 0.07
COL18A1-202ENST00000355480 LHFPL6Q9Y693 200 aa15.52■□□□□ 0.07
COL18A1-202ENST00000355480 SERF2P84101 59 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 NUP37Q8NFH4 326 aa15.51■□□□□ 0.07
COL18A1-202ENST00000355480 PACRGQ96M98 296 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-202ENST00000355480 LMX1BO60663 402 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms