RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 DUSP3P51452 185 aaPredicted RBP9.29□□□□□ -0.92
SND1-201ENST00000354725 HNRNPA3P51991 378 aaKnown RBP9.29□□□□□ -0.92
SND1-201ENST00000354725 GNB2P62879 340 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 ADAM8P78325 824 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 TLE3Q04726 772 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 EIF2B1Q14232 305 aaKnown RBP9.29□□□□□ -0.92
SND1-201ENST00000354725 SPIN3Q5JUX0 258 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 C1orf140Q5VVS0 124 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 TMEM170AQ8WVE7 144 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 PLEK2Q9NYT0 353 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 UQCR10Q9UDW1 63 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 A0A0A6YYD4 124 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 SPAARA0A1B0GVQ0 90 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 SERPINE2P07093 398 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 FAM87AP0C7U9 286 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 ZNF28P17035 718 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 CX3CR1P49238 355 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 VAX1Q5SQQ9 334 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 LFNGQ8NES3 379 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 OR10S1Q8NGN2 331 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 OR10X1Q8NGY0 326 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 NAT6Q93015 286 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 IL22RA2Q969J5 263 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 TMEM230Q96A57 120 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 ADOQ96SZ5 270 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 TMEM106BQ9NUM4 274 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 ABI3Q9P2A4 366 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 B3GALT1Q9Y5Z6 326 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 SPTBN4Q9H254 2564 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 TMED7-TICAM2A0A0A6YYA0 188 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 IGKV1D-43A0A0B4J1Z2 117 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 OR2J3O76001 311 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 MPZL1O95297 269 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 TTRP02766 147 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 VSIG8P0DPA2 414 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 IL13RA1P78552 427 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 PRDX4Q13162 271 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 PLPPR5Q32ZL2 321 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 LHFPL1Q86WI0 220 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 MMABQ96EY8 250 aaPredicted RBP9.29□□□□□ -0.92
SND1-201ENST00000354725 FOXN4Q96NZ1 517 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 P2RX4Q99571 388 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 PIEZO1Q92508 2521 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 IGHV5-51A0A0C4DH38 117 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 IGHV5-10-1A0A0J9YXX1 117 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 K7EN84 100 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 JTBO76095 146 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 SRP19P09132 144 aaKnown RBP9.28□□□□□ -0.92
SND1-201ENST00000354725 HLA-DOBP13765 273 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 PGCP20142 388 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 CCL1P22362 96 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 TAS2R30P59541 319 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 EIF3IQ13347 325 aaKnown RBP9.28□□□□□ -0.92
SND1-201ENST00000354725 OTPQ5XKR4 325 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 ZNF880Q6PDB4 577 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 C12orf54Q6X4T0 127 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 Q6ZN92 141 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 MARCH3Q86UD3 253 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 ADAD2Q8NCV1 583 aaKnown RBP9.28□□□□□ -0.92
SND1-201ENST00000354725 CHRDL1Q9BU40 450 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 RBM24Q9BX46 236 aaKnown RBP9.28□□□□□ -0.92
SND1-201ENST00000354725 EMC9Q9Y3B6 208 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 KIAA1549Q9HCM3 1950 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 GAPDHP04406 335 aaKnown RBP9.28□□□□□ -0.92
SND1-201ENST00000354725 CCDC144NLQ6NUI1 221 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 Q6ZSR3 168 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 ZNF563Q8TA94 476 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 TMEM37Q8WXS4 190 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 COA3Q9Y2R0 106 aaPredicted RBP9.28□□□□□ -0.92
SND1-201ENST00000354725 RIF1Q5UIP0 2472 aaKnown RBP9.28□□□□□ -0.92
SND1-201ENST00000354725 IGLV3-1P01715 115 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 ZNF17P17021 662 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 CD33P20138 364 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 AZU1P20160 251 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 PPP1CCP36873 323 aaKnown RBP9.28□□□□□ -0.92
SND1-201ENST00000354725 ZNF584Q8IVC4 421 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 SNIP1Q8TAD8 396 aaKnown RBP9.28□□□□□ -0.92
SND1-201ENST00000354725 SARAFQ96BY9 339 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 TMEM38BQ9NVV0 291 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 WIPI2Q9Y4P8 454 aa9.28□□□□□ -0.92
SND1-201ENST00000354725 A0A1B0GV50 99 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 DCDC2BA2VCK2 349 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 RBFOX3A6NFN3 312 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 H3BSH0 61 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 STK17BO94768 372 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 TOX4O94842 621 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 CLDN6P56747 220 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 SUPT4H1P63272 117 aaKnown RBP9.27□□□□□ -0.93
SND1-201ENST00000354725 HLA-DRB3P79483 266 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 ZNF627Q7L945 461 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 TRAPPC6BQ86SZ2 158 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 GVQW1Q8N7I0 195 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 ZNF709Q8N972 641 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 OR4P4Q8NGL7 312 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 LHX4Q969G2 390 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 ADAT3Q96EY9 351 aaPredicted RBP9.27□□□□□ -0.93
SND1-201ENST00000354725 NUDT22Q9BRQ3 303 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 SPRY4Q9C004 299 aa9.27□□□□□ -0.93
SND1-201ENST00000354725 ZNF207O43670 478 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms