RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 FGFBP3Q8TAT2 258 aa8.61□□□□□ -1.03
SYNE1-203ENST00000354674 EHFQ9NZC4 300 aa8.61□□□□□ -1.03
SYNE1-203ENST00000354674 ZNF319Q9P2F9 582 aa8.61□□□□□ -1.03
SYNE1-203ENST00000354674 RNF115Q9Y4L5 304 aa8.61□□□□□ -1.03
SYNE1-203ENST00000354674 BORCS7-ASMTA0A0B4J1R7 106 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 A0A1W2PP11 408 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 ODAMA1E959 279 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 CST7O76096 145 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 BMP5P22003 454 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 CRYGSP22914 178 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 OR10J1P30954 320 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 ZNF92Q03936 586 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 ICAM4Q14773 271 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 TPTE2P1Q5T6R2 138 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 Q6ZT83 130 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 DOLPP1Q86YN1 238 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.6□□□□□ -1.03
SYNE1-203ENST00000354674 POC1AQ8NBT0 407 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 OR1K1Q8NGR3 316 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 RNASEH2CQ8TDP1 164 aaKnown RBP8.6□□□□□ -1.03
SYNE1-203ENST00000354674 STARD4Q96DR4 205 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 ATP5SQ99766 215 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 OR2H1Q9GZK4 316 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 MAGT1Q9H0U3 335 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 HIPK2Q9H2X6 1198 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 CNTD2Q9H8S5 307 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 MOB1AQ9H8S9 216 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 DOCK7Q96N67 2140 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 SLC17A2O00624 439 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 PET100P0DJ07 73 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 ZNF32P17041 273 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 GABRR1P24046 479 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 KRTDAPP60985 99 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 VWA1Q6PCB0 445 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 THRSPQ92748 146 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 RPUSD4Q96CM3 377 aaKnown RBP8.6□□□□□ -1.03
SYNE1-203ENST00000354674 OR6C3Q9NZP0 311 aa8.6□□□□□ -1.03
SYNE1-203ENST00000354674 TMEM238LA0A1B0GVL6 79 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 SFT2D2O95562 160 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 HLA-HP01893 362 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 COX5AP20674 150 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 FAM3AP98173 230 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 PSG4Q00888 419 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 ARFRP1Q13795 201 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 RPRMLQ8N4K4 120 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 OR13D1Q8NGV5 346 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 CLEC5AQ9NY25 188 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 DHDHQ9UQ10 334 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 SLC5A6Q9Y289 635 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 NCOA6Q14686 2063 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-203ENST00000354674 TRBV5-7A0A0A0MS05 114 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 KIR2DL5BA0A0G2JN68 375 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 KIR2DL5BA0A0G2JPC4 375 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 FAM24AA6NFZ4 105 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 SAP30O75446 220 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 OR5AC1P0C628 307 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 ZNF20P17024 532 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 IGHV1-2P23083 117 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 GCH1P30793 250 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 RBMXP38159 391 aaKnown RBP8.59□□□□□ -1.03
SYNE1-203ENST00000354674 UBE2V1Q13404 147 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 DNLZQ5SXM8 178 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 GPR157Q5UAW9 335 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 GFRALQ6UXV0 394 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 C16orf82Q7Z2V1 217 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 KIR2DL5AQ8N109 375 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 OR5L1Q8NGL2 311 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 HSPB9Q9BQS6 159 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 WNT10AQ9GZT5 417 aa8.59□□□□□ -1.03
SYNE1-203ENST00000354674 SEPSECSQ9HD40 501 aaKnown RBP8.59□□□□□ -1.03
SYNE1-203ENST00000354674 PRRC2CQ9Y520 2896 aaKnown RBP8.59□□□□□ -1.04
SYNE1-203ENST00000354674 TAAR5O14804 337 aa8.59□□□□□ -1.04
SYNE1-203ENST00000354674 IGLV3-1P01715 115 aa8.59□□□□□ -1.04
SYNE1-203ENST00000354674 TTRP02766 147 aa8.59□□□□□ -1.04
SYNE1-203ENST00000354674 FBLN7Q53RD9 439 aa8.59□□□□□ -1.04
SYNE1-203ENST00000354674 TCF23Q7RTU1 214 aa8.59□□□□□ -1.04
SYNE1-203ENST00000354674 LHFPL4Q7Z7J7 247 aa8.59□□□□□ -1.04
SYNE1-203ENST00000354674 OR1F12Q8NHA8 337 aa8.59□□□□□ -1.04
SYNE1-203ENST00000354674 LYPD6BQ8NI32 183 aa8.59□□□□□ -1.04
SYNE1-203ENST00000354674 PBOV1Q9GZY1 135 aa8.59□□□□□ -1.04
SYNE1-203ENST00000354674 ZNF503-AS2A6NEH8 195 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 PRRG2O14669 202 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 GNG7O60262 68 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 Q6ZSR3 168 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 CNEP1R1Q8N9A8 125 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 C1orf162Q8NEQ5 155 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-203ENST00000354674 OR5D18Q8NGL1 313 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 SFXN3Q9BWM7 321 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 MEGF9Q9H1U4 602 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 NCOR1P1Q9H4R4 102 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 ZNF665Q9H7R5 613 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 PLEK2Q9NYT0 353 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 ERRFI1Q9UJM3 462 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-203ENST00000354674 DSPP15924 2871 aaKnown RBP8.58□□□□□ -1.04
SYNE1-203ENST00000354674 ITPR1Q14643 2758 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 PATE4P0C8F1 98 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 CCL1P22362 96 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 ATP6V0CP27449 155 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 CHRNA7P36544 502 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 ZNF121P58317 390 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms