RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 HAND1O96004 215 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 IGHV3-43DP0DP04 118 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 SRSF6Q13247 344 aaKnown RBP16.49■□□□□ 0.23
COL13A1-201ENST00000354547 RYDENQ9NUL5 291 aaKnown RBP16.49■□□□□ 0.23
COL13A1-201ENST00000354547 METTL1Q9UBP6 276 aaKnown RBP16.49■□□□□ 0.23
COL13A1-201ENST00000354547 CADP27708 2225 aa16.49■□□□□ 0.23
COL13A1-201ENST00000354547 HEATR1Q9H583 2144 aaKnown RBP16.49■□□□□ 0.23
COL13A1-201ENST00000354547 DEFB108AA8MXU0 73 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 IL2RGP31785 369 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 CYB5BO43169 146 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 IGHV2-5P01817 119 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 PGA5P0DJD9 388 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 CD200P41217 278 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 OR8G5Q8NG78 346 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 MRGPRDQ8TDS7 321 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 CEBPZOSA8MTT3 80 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 S100A8P05109 93 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 MDH2P40926 338 aaKnown RBP16.48■□□□□ 0.23
COL13A1-201ENST00000354547 GABRA2P47869 451 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 FABP6P51161 128 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 ELOBQ15370 118 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 PRAMEF6Q5VXH4 476 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 LSM10Q969L4 123 aaKnown RBP16.48■□□□□ 0.23
COL13A1-201ENST00000354547 RCC1LQ96I51 464 aaKnown RBP16.48■□□□□ 0.23
COL13A1-201ENST00000354547 KCNIP1Q9NZI2 227 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 CLN8Q9UBY8 286 aa16.48■□□□□ 0.23
COL13A1-201ENST00000354547 LOC102723971A0A1B0GUV8 181 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 CCL11P51671 97 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 SOX8P57073 446 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 ERVK11-1P61568 191 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 RPL30P62888 115 aaKnown RBP16.47■□□□□ 0.23
COL13A1-201ENST00000354547 PDZD11Q5EBL8 140 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 MSL2Q9HCI7 577 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 CEP250Q9BV73 2442 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 LINC00587B1AMM8 73 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 RD3LP0DJH9 198 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 HBG1P69891 147 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 HBG2P69892 147 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 KHDC3LQ587J8 217 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 KLF14Q8TD94 323 aaPredicted RBP16.47■□□□□ 0.23
COL13A1-201ENST00000354547 TCTEX1D2Q8WW35 142 aa16.47■□□□□ 0.23
COL13A1-201ENST00000354547 TGFBR3Q03167 851 aa16.46■□□□□ 0.23
COL13A1-201ENST00000354547 MOB1BQ7L9L4 216 aa16.46■□□□□ 0.23
COL13A1-201ENST00000354547 C12orf77C9JDV5 145 aa16.46■□□□□ 0.23
COL13A1-201ENST00000354547 SLC38A11Q08AI6 406 aa16.46■□□□□ 0.23
COL13A1-201ENST00000354547 YPEL4Q96NS1 127 aa16.46■□□□□ 0.23
COL13A1-201ENST00000354547 RBKSQ9H477 322 aa16.46■□□□□ 0.23
COL13A1-201ENST00000354547 FABP1P07148 127 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 SMIM6P0DI80 62 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 SLC25A6P12236 298 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 SP5Q6BEB4 398 aaPredicted RBP16.45■□□□□ 0.22
COL13A1-201ENST00000354547 Q8IYB0 196 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 GALMQ96C23 342 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 MDKP21741 143 aaPredicted RBP16.45■□□□□ 0.22
COL13A1-201ENST00000354547 TMPRSS5Q9H3S3 457 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 METRNQ9UJH8 293 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 BCL2P10415 239 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 EIF2S3P41091 472 aaKnown RBP16.45■□□□□ 0.22
COL13A1-201ENST00000354547 B2MP61769 119 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 C4orf17Q53FE4 359 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 DCTN5Q9BTE1 182 aa16.45■□□□□ 0.22
COL13A1-201ENST00000354547 NKX2-8O15522 239 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 MLNRO43193 412 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 S1PR2O95136 353 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 IGHV3-13P01766 116 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 IGHV3-7P01780 117 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 DEFA4P12838 97 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 RAC2P15153 192 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 SSTR5P35346 364 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 ZNF146Q15072 292 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 LRRC75BQ2VPJ9 315 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 Q6ZR03 302 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 ZDHHC16Q969W1 377 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 C5orf30Q96GV9 206 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 GSN-AS1Q9NRJ2 163 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 MAP1LC3B2A6NCE7 125 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 NPIPB11E5RHQ5 1161 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 HBZP02008 142 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 TRGC2P03986 189 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 FAM90A2PQ658T7 463 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 NINJ1Q92982 152 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 MALSU1Q96EH3 234 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 GMPPAQ96IJ6 420 aaPredicted RBP16.44■□□□□ 0.22
COL13A1-201ENST00000354547 MAP1LC3BQ9GZQ8 125 aa16.44■□□□□ 0.22
COL13A1-201ENST00000354547 WDR61Q9GZS3 305 aaKnown RBP16.44■□□□□ 0.22
COL13A1-201ENST00000354547 MBNL3Q9NUK0 354 aaKnown RBP16.44■□□□□ 0.22
COL13A1-201ENST00000354547 OR5H1A6NKK0 313 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 C17orf98A8MV24 154 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 TNFRSF9Q07011 255 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 VWA1Q6PCB0 445 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 TMEM178AQ8NBL3 297 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 SLC25A22Q9H936 323 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 SLC39A9Q9NUM3 307 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 MIOXQ9UGB7 285 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 TMEM30CPA0ZSE6 113 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 GLIPR1P48060 266 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 EDDM3AQ14507 147 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 DPPA3Q6W0C5 159 aa16.43■□□□□ 0.22
COL13A1-201ENST00000354547 TAF15Q92804 592 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL13A1-201ENST00000354547 LHX4Q969G2 390 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms