RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 GTF2F2P13984 249 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 CBR1P16152 277 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 RCC1P18754 421 aaPredicted RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 ZP3P21754 424 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 CCNOP22674 350 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 AADACP22760 399 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 GDF1P27539 372 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 S100A11P31949 105 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 GUCA1AP43080 201 aaPredicted RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 ACTBP60709 375 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 SUMO2P61956 95 aaKnown RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 ACTG1P63261 375 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 STUMQ69YW2 141 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 AWAT2Q6E213 333 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 CHMP1BQ7LBR1 199 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 AAED1Q7RTV5 226 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 HDDC2Q7Z4H3 204 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 HSD17B13Q7Z5P4 300 aaPredicted RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 OSR2Q8N2R0 312 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 C17orf78Q8N4C9 275 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 STEAP2Q8NFT2 490 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 OR2T35Q8NGX2 323 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 ENKURQ8TC29 256 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 SUN5Q8TC36 379 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 KLF14Q8TD94 323 aaPredicted RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 RAB3CQ96E17 227 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 TECTBQ96PL2 329 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 PARD6GQ9BYG4 376 aaPredicted RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 TMEM222Q9H0R3 208 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 NCOR1P1Q9H4R4 102 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 DCAF16Q9NXF7 216 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 ABI3Q9P2A4 366 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 TEKT2Q9UIF3 430 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 CARHSP1Q9Y2V2 147 aaKnown RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 ABCA1O95477 2261 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 GJE1A6NN92 205 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 CD300LBA8K4G0 201 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 SRRM5B3KS81 715 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 F5H5K5 113 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 RAMP3O60896 148 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 PDCD6O75340 191 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 SCO1O75880 301 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 MMP23AO75900 390 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 IGHV3-13P01766 116 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 P04436 131 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 CRYGBP07316 175 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 SELLP14151 372 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 ITGA3P26006 1051 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 LPAR6P43657 344 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 CEBPDP49716 269 aaPredicted RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 NPY4RP50391 375 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 GPM6AP51674 278 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 F2RL1P55085 397 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 SNU13P55769 128 aaKnown RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 TGFBR3Q03167 851 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 SRSF1Q07955 248 aaKnown RBP eCLIP1.88□□□□□ -2.11
VPS54-202ENST00000354504 MEF2DQ14814 521 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 P2RY6Q15077 328 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 FBXL19-AS1Q494R0 122 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 MALRD1Q5VYJ5 2156 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 HCP5Q6MZN7 132 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 PRSS54Q6PEW0 395 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 ACP7Q6ZNF0 438 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 LYZL2Q7Z4W2 148 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 DOLPP1Q86YN1 238 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 CCDC36Q8IYA8 594 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 FBXL14Q8N1E6 418 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 C19orf18Q8NEA5 215 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 OR8S1Q8NH09 359 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 OR14L1PQ8NHC6 308 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 DPF1Q92782 380 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 ST6GALNAC6Q969X2 333 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 SLAMF9Q96A28 289 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 NAA11Q9BSU3 229 aaPredicted RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 RBM24Q9BX46 236 aaKnown RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 OR2J1Q9GZK6 312 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 GAB2Q9UQC2 676 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 TLN2Q9Y4G6 2542 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 WNK2Q9Y3S1 2297 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 FAT2Q9NYQ8 4349 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 NAV3Q8IVL0 2385 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 IGHV3-64DA0A0J9YX35 117 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 C5orf49A4QMS7 147 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 ZSCAN5BA6NJL1 495 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 C17orf98A8MV24 154 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 A8MXE2 369 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 PRSS44E7EML9 344 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 E7EUB6 86 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 F5H5P2 479 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 K7ENP7 123 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 CREBL2O60519 120 aaPredicted RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 PAGE4O60829 102 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 TSC22D2O75157 780 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 PGLYRP1O75594 196 aaPredicted RBP1.88□□□□□ -2.11
VPS54-202ENST00000354504 OR2H2O95918 312 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 PPYP01298 95 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 IGLV2-23P01705 113 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 HOXB5P09067 269 aa1.88□□□□□ -2.11
VPS54-202ENST00000354504 NPSP0C0P6 89 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms