RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 MEGF11A6BM72 1044 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 ANKRD30BLA7E2S9 258 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 J3KTA2 159 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 NDUFB2O95178 105 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 ELK1P19419 428 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 C22orf42Q6IC83 251 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 LYPD4Q6UWN0 246 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 WDR82Q6UXN9 313 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 OR2W3Q7Z3T1 314 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 TSEN54Q7Z6J9 526 aaKnown RBP9.03□□□□□ -0.96
RTN3-204ENST00000354497 WDR86Q86TI4 376 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 ZNF573Q86YE8 665 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 AJUBAQ96IF1 538 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 PUS1Q9Y606 427 aaKnown RBP eCLIP9.03□□□□□ -0.96
RTN3-204ENST00000354497 CXorf65A6NEN9 183 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.02□□□□□ -0.97
RTN3-204ENST00000354497 DCTN6O00399 190 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 CDIPTO14735 213 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 RPLP1P05386 114 aaKnown RBP9.02□□□□□ -0.97
RTN3-204ENST00000354497 NHLRC4P0CG21 123 aaPredicted RBP9.02□□□□□ -0.97
RTN3-204ENST00000354497 AMY2BP19961 511 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 ANOS1P23352 680 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 ACKR3P25106 362 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 BDKRB2P30411 391 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 CDKN2AP42771 156 aaKnown RBP9.02□□□□□ -0.97
RTN3-204ENST00000354497 GABRA2P47869 451 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 OR2B8PP59922 312 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 GAMTQ14353 236 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 RHEBQ15382 184 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 SURF2Q15527 256 aaPredicted RBP9.02□□□□□ -0.97
RTN3-204ENST00000354497 PNLIPRP3Q17RR3 467 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 STUMQ69YW2 141 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 MBOAT2Q6ZWT7 520 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 SSX6Q7RTT6 188 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 C11orf53Q8IXP5 236 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 MKXQ8IYA7 352 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 Q8N2B8 174 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 AQP11Q8NBQ7 271 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 PIFOQ8TCI5 191 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 C15orf40Q8WUR7 153 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 THEM6Q8WUY1 208 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 FAM46AQ96IP4 442 aaKnown RBP9.02□□□□□ -0.97
RTN3-204ENST00000354497 GAFA1Q96PS6 74 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 FUZQ9BT04 418 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 JAM3Q9BX67 310 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 TEX12Q9BXU0 123 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 WNT10AQ9GZT5 417 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 INPP5EQ9NRR6 644 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 HAO2Q9NYQ3 351 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 B9D1Q9UPM9 204 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 TCF19Q9Y242 345 aa9.02□□□□□ -0.97
RTN3-204ENST00000354497 EXOSC1Q9Y3B2 195 aaKnown RBP9.02□□□□□ -0.97
RTN3-204ENST00000354497 A0A087WUU8 490 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 IGLV1-36A0A0B4J1U3 117 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 UBE2QL1A1L167 161 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 ARPC5O15511 151 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 SYNGR1O43759 233 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 GLCEO94923 617 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 CD5P06127 495 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 LMO1P25800 156 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 KDELR2P33947 212 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 EGFEM1PQ0D2K5 195 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 Q6ZS46 218 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 LHFPL4Q7Z7J7 247 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 COMMD1Q8N668 190 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 NUDT10Q8NFP7 164 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 OR8J1Q8NGP2 316 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 OR1S2Q8NGQ3 325 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 WIPF2Q8TF74 440 aaPredicted RBP9.01□□□□□ -0.97
RTN3-204ENST00000354497 RNF141Q8WVD5 230 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 SMIM4Q8WVI0 70 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 ASCL2Q99929 193 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 WDR13Q9H1Z4 485 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 NRIP3Q9NQ35 241 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 CLEC2DQ9UHP7 191 aa9.01□□□□□ -0.97
RTN3-204ENST00000354497 TSSC4Q9Y5U2 329 aaPredicted RBP9.01□□□□□ -0.97
RTN3-204ENST00000354497 KANTRA0A1W2PQU2 76 aa9□□□□□ -0.97
RTN3-204ENST00000354497 F8VVB4 439 aa9□□□□□ -0.97
RTN3-204ENST00000354497 F8VWA3 439 aa9□□□□□ -0.97
RTN3-204ENST00000354497 F2RL2O00254 374 aa9□□□□□ -0.97
RTN3-204ENST00000354497 LANCL1O43813 399 aa9□□□□□ -0.97
RTN3-204ENST00000354497 RENP00797 406 aa9□□□□□ -0.97
RTN3-204ENST00000354497 GCGP01275 180 aa9□□□□□ -0.97
RTN3-204ENST00000354497 IFNW1P05000 195 aa9□□□□□ -0.97
RTN3-204ENST00000354497 OR5AC1P0C628 307 aa9□□□□□ -0.97
RTN3-204ENST00000354497 CAV2P51636 162 aa9□□□□□ -0.97
RTN3-204ENST00000354497 TAF13Q15543 124 aa9□□□□□ -0.97
RTN3-204ENST00000354497 C12orf73Q69YU5 71 aa9□□□□□ -0.97
RTN3-204ENST00000354497 OR10K2Q6IF99 312 aa9□□□□□ -0.97
RTN3-204ENST00000354497 ZNF788Q6ZQV5 615 aa9□□□□□ -0.97
RTN3-204ENST00000354497 CENPVQ7Z7K6 275 aaPredicted RBP9□□□□□ -0.97
RTN3-204ENST00000354497 SLC26A10Q8NG04 563 aa9□□□□□ -0.97
RTN3-204ENST00000354497 OR10G2Q8NGC3 310 aa9□□□□□ -0.97
RTN3-204ENST00000354497 RPS4Y2Q8TD47 263 aa9□□□□□ -0.97
RTN3-204ENST00000354497 GALNT14Q96FL9 552 aa9□□□□□ -0.97
RTN3-204ENST00000354497 YPEL4Q96NS1 127 aa9□□□□□ -0.97
RTN3-204ENST00000354497 COMMD4Q9H0A8 199 aa9□□□□□ -0.97
RTN3-204ENST00000354497 PNRC2Q9NPJ4 139 aaKnown RBP9□□□□□ -0.97
RTN3-204ENST00000354497 PITPNC1Q9UKF7 332 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms