RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ZNF429Q86V71 674 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 PDPNQ86YL7 162 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 NECAP1Q8NC96 275 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 FAAP24Q9BTP7 215 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 SFXN3Q9BWM7 321 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 MRPL20Q9BYC9 149 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 TRABDQ9H4I3 376 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 RERGLQ9H628 205 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 PLEKHF2Q9H8W4 249 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 XPNPEP1Q9NQW7 623 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 SLC7A11Q9UPY5 501 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 A0A0X1KG70 313 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 LOC389332A0A1B0GUA5 103 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 FAM92AA1XBS5 289 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 MIF4GDA9UHW6 222 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 TMX2-CTNND1H3BSU7 103 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF207O43670 478 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CHP2O43745 196 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 APOC1P02654 83 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 MLNP12872 115 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 GABRA1P14867 456 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CXCL2P19875 107 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 G0S2P27469 103 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CDKN2CP42773 168 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 RAB2AP61019 212 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 RPL19P84098 196 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 DEFA5Q01523 94 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 ADIGQ0VDE8 80 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CDC20Q12834 499 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 C1DQ13901 141 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 RNASE13Q5GAN3 156 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CLEC12AQ5QGZ9 265 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 HES3Q5TGS1 186 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 OTPQ5XKR4 325 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 FAAP20Q6NZ36 180 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 CLEC20AQ6ZU45 233 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 SLC16A13Q7RTY0 426 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 MRPL52Q86TS9 123 aaKnown RBP1.08□□□□□ -2.24
BRCA1-202ENST00000354071 OR4C13Q8NGP0 309 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 OR11L1Q8NGX0 322 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 OR6K3Q8NGY3 331 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 OR1P1Q8NH06 330 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 OR51Q1Q8NH59 317 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 PHOSPHO2Q8TCD6 241 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 BIRC8Q96P09 236 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 OR2A5Q96R48 311 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 PFDN5Q99471 154 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 S100A13Q99584 98 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 SULT4A1Q9BR01 284 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 PHIPQ8WWQ0 1821 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 ABCC11Q96J66 1382 aa1.08□□□□□ -2.24
BRCA1-202ENST00000354071 MYO10Q9HD67 2058 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TNRC6BQ9UPQ9 1833 aaKnown RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 A0A0A6YYH2 397 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 IGHV3-72A0A0B4J1Y9 119 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 A6NJ64 397 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 C21orf140B9A014 251 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 I3L521 148 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 LGALS9O00182 355 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TPST1O60507 370 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 HPGDSO60760 199 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 DHFRP00374 187 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MT-ND4P03905 459 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 F8A1P23610 371 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 HOXA6P31267 233 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 IFNGR2P38484 337 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 COPZ1P61923 177 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 AP1S1P61966 158 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 RPL10AP62906 217 aaKnown RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 DYNLT1P63172 113 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ARG2P78540 354 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 IFITM3Q01628 133 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TSNQ15631 228 aaKnown RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF239Q16600 458 aaKnown RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TNFAIP8L3Q5GJ75 292 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM255AQ5JRV8 349 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SAPCD1Q5SSQ6 148 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 GALNT10Q86SR1 603 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SAXO1Q8IYX7 474 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 GPD1LQ8N335 351 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TBC1D19Q8N5T2 526 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 CYB561D1Q8N8Q1 229 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR10Z1Q8NGY1 313 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR2T4Q8NH00 348 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ZFAND1Q8TCF1 268 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SMIM19Q96E16 107 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 IMMP1LQ96LU5 166 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 KCTD7Q96MP8 289 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ZIM3Q96PE6 472 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 DERL3Q96Q80 235 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TEAD3Q99594 435 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 RTBDNQ9BSG5 229 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ULBP1Q9BZM6 244 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 EFCAB1Q9HAE3 211 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM138Q9NPI0 162 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TAS2R9Q9NYW1 312 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MARCOQ9UEW3 520 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TPRKBQ9Y3C4 175 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PCYT1BQ9Y5K3 369 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR51B4Q9Y5P0 310 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms