RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CEACAM6P40199 344 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 CD81P60033 236 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 TNFRSF9Q07011 255 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 RPP25LQ8N5L8 163 aaKnown RBP20.68■□□□□ 0.9
CPNE1-202ENST00000352393 NANOS1Q8WY41 292 aaKnown RBP20.68■□□□□ 0.9
CPNE1-202ENST00000352393 C12orf49Q9H741 205 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 PLA2G3Q9NZ20 509 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 NAT8Q9UHE5 227 aa20.68■□□□□ 0.9
CPNE1-202ENST00000352393 COLQQ9Y215 455 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-202ENST00000352393 DOCK7Q96N67 2140 aa20.67■□□□□ 0.9
CPNE1-202ENST00000352393 C9orf172C9J069 976 aa20.67■□□□□ 0.9
CPNE1-202ENST00000352393 PGA5P0DJD9 388 aa20.67■□□□□ 0.9
CPNE1-202ENST00000352393 HIST1H1BP16401 226 aaKnown RBP20.67■□□□□ 0.9
CPNE1-202ENST00000352393 PLGLB1Q02325 96 aa20.67■□□□□ 0.9
CPNE1-202ENST00000352393 ZNF146Q15072 292 aa20.67■□□□□ 0.9
CPNE1-202ENST00000352393 CYP2G1PQ6ZSU1 146 aa20.67■□□□□ 0.9
CPNE1-202ENST00000352393 BEND4Q6ZU67 534 aa20.67■□□□□ 0.9
CPNE1-202ENST00000352393 LHX4Q969G2 390 aa20.67■□□□□ 0.9
CPNE1-202ENST00000352393 PFDN5Q99471 154 aa20.67■□□□□ 0.9
CPNE1-202ENST00000352393 HSPB7Q9UBY9 170 aa20.67■□□□□ 0.9
CPNE1-202ENST00000352393 P0C879 139 aa20.66■□□□□ 0.9
CPNE1-202ENST00000352393 MEF2BQ02080 365 aaPredicted RBP20.66■□□□□ 0.9
CPNE1-202ENST00000352393 OR8G2PQ6IF36 304 aa20.66■□□□□ 0.9
CPNE1-202ENST00000352393 FAM180AQ6UWF9 173 aa20.66■□□□□ 0.9
CPNE1-202ENST00000352393 SMOC1Q9H4F8 434 aa20.66■□□□□ 0.9
CPNE1-202ENST00000352393 KIAA2026Q5HYC2 2103 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 LAMTOR5O43504 91 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 CLDN1O95832 211 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 ACSM6Q6P461 480 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 MYPOPQ86VE0 399 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-202ENST00000352393 SMIM7Q9BQ49 75 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 SLC39A9Q9NUM3 307 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 J3QW42 95 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 NCR3LG1Q68D85 454 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 LINC00696Q6ZRV3 163 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 ZNF645Q8N7E2 425 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 FOXJ2Q9P0K8 574 aa20.65■□□□□ 0.9
CPNE1-202ENST00000352393 KBTBD11O94819 623 aa20.64■□□□□ 0.89
CPNE1-202ENST00000352393 TBC1D28Q2M2D7 210 aa20.64■□□□□ 0.89
CPNE1-202ENST00000352393 C4orf17Q53FE4 359 aa20.64■□□□□ 0.89
CPNE1-202ENST00000352393 DCAF10Q5QP82 559 aa20.64■□□□□ 0.89
CPNE1-202ENST00000352393 FBXW9Q5XUX1 488 aa20.64■□□□□ 0.89
CPNE1-202ENST00000352393 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.64■□□□□ 0.89
CPNE1-202ENST00000352393 C5orf30Q96GV9 206 aa20.64■□□□□ 0.89
CPNE1-202ENST00000352393 SH2D1BO14796 132 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 SMPD2O60906 423 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 NXPH2O95156 264 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 FABP4P15090 132 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 EIF4EBP1Q13541 118 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-202ENST00000352393 PYGO2Q9BRQ0 406 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 GFOD1Q9NXC2 390 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 RAMP3O60896 148 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 MEOX1P50221 254 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 ADIRFQ15847 76 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 C16orf82Q7Z2V1 217 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 ZBTB34Q8NCN2 500 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 OR10A7Q8NGE5 316 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 SNX22Q96L94 193 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 GUCD1Q96NT3 240 aa20.63■□□□□ 0.89
CPNE1-202ENST00000352393 CDIPTO14735 213 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 PFN1P07737 140 aaKnown RBP20.62■□□□□ 0.89
CPNE1-202ENST00000352393 TMEM241Q24JQ0 296 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 TMEM147Q9BVK8 224 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 SRD5A3Q9H8P0 318 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 CTXND1A0A1B0GTU2 59 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 TMEM250H0YL14 139 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 CD55P08174 381 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 PLA2G5P39877 138 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 MSMO1Q15800 293 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 ATP6V1FQ16864 119 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 OR1L1Q8NH94 360 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 OR2J1Q9GZK6 312 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 SLC25A22Q9H936 323 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 PITPNC1Q9UKF7 332 aa20.62■□□□□ 0.89
CPNE1-202ENST00000352393 PMS2P5A8MQ11 134 aa20.61■□□□□ 0.89
CPNE1-202ENST00000352393 CELA3BP08861 270 aa20.61■□□□□ 0.89
CPNE1-202ENST00000352393 PPP1CBP62140 327 aa20.61■□□□□ 0.89
CPNE1-202ENST00000352393 VASH2Q86V25 355 aa20.61■□□□□ 0.89
CPNE1-202ENST00000352393 OR4X1Q8NH49 305 aa20.61■□□□□ 0.89
CPNE1-202ENST00000352393 HIST1H2BLQ99880 126 aa20.61■□□□□ 0.89
CPNE1-202ENST00000352393 GPR87Q9BY21 358 aa20.61■□□□□ 0.89
CPNE1-202ENST00000352393 OR2D2Q9H210 308 aa20.61■□□□□ 0.89
CPNE1-202ENST00000352393 MDKP21741 143 aaPredicted RBP20.6■□□□□ 0.89
CPNE1-202ENST00000352393 G6PCP35575 357 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 RPL23P62829 140 aaKnown RBP20.6■□□□□ 0.89
CPNE1-202ENST00000352393 RPL30P62888 115 aaKnown RBP20.6■□□□□ 0.89
CPNE1-202ENST00000352393 ZNF766Q5HY98 468 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 TMEM30CPA0ZSE6 113 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 ODAMA1E959 279 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 LRRC30A6NM36 301 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 NDUFS6O75380 124 aaKnown RBP20.6■□□□□ 0.89
CPNE1-202ENST00000352393 HAND1O96004 215 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 SP1P08047 785 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 ERVS71-1P61550 626 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 BSXQ3C1V8 233 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 ALKBH6Q3KRA9 238 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 WDYHV1Q96HA8 205 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 PACRGQ96M98 296 aaPredicted RBP20.6■□□□□ 0.89
CPNE1-202ENST00000352393 HES4Q9HCC6 221 aa20.6■□□□□ 0.89
CPNE1-202ENST00000352393 CLN8Q9UBY8 286 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms