RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 ZNF705GA8MUZ8 300 aaPredicted RBP11.68□□□□□ -0.54
SMC6-201ENST00000351948 LY6EQ16553 131 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 HCP5Q6MZN7 132 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 OR10S1Q8NGN2 331 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 OR10G4Q8NGN3 311 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 OR10G9Q8NGN4 311 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 OR10G7Q8NGN6 311 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 MARS2Q96GW9 593 aaKnown RBP11.68□□□□□ -0.54
SMC6-201ENST00000351948 REPIN1Q9BWE0 567 aaKnown RBP11.68□□□□□ -0.54
SMC6-201ENST00000351948 CLDN16Q9Y5I7 305 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 VAX1Q5SQQ9 334 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 PRSS33Q8NF86 280 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 ZNF596Q8TC21 504 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 C1QTNF5Q9BXJ0 243 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 ZNF107Q9UII5 783 aaPredicted RBP11.68□□□□□ -0.54
SMC6-201ENST00000351948 V9GYS6 101 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 PRR30Q53SZ7 412 aaPredicted RBP11.68□□□□□ -0.54
SMC6-201ENST00000351948 DPF1Q92782 380 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 SCMH1Q96GD3 660 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 SS18L1O75177 396 aaPredicted RBP11.67□□□□□ -0.54
SMC6-201ENST00000351948 ASPHD2Q6ICH7 369 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 TUBG2Q9NRH3 451 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 TMEM106BQ9NUM4 274 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 ZNF90Q03938 601 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 OR5I1Q13606 314 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 ARPC4-TTLL3A0A0A6YYG9 625 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 LOC390937A0A1W2PQ73 354 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 OR2C1O95371 312 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 DAOP14920 347 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 LCN2P80188 198 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 BTNL8Q6UX41 500 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 NR2C2APQ86WQ0 139 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 ABHD12Q8N2K0 398 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 TLNRD1Q9H1K6 362 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 PARP11Q9NR21 331 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 SMCO4Q9NRQ5 59 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 OR51B2Q9Y5P1 312 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 HELZP42694 1942 aaKnown RBP11.67□□□□□ -0.54
SMC6-201ENST00000351948 SLC25A17O43808 307 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 NHLH2Q02577 135 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 KCNMB1Q16558 191 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 GUK1Q16774 197 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 PLA2G2CQ5R387 149 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 PNKDQ8N490 385 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 KDF1Q8NAX2 398 aaPredicted RBP11.67□□□□□ -0.54
SMC6-201ENST00000351948 NKX6-2Q9C056 277 aaPredicted RBP11.67□□□□□ -0.54
SMC6-201ENST00000351948 NCOR2Q9Y618 2525 aa11.67□□□□□ -0.54
SMC6-201ENST00000351948 ALX3O95076 343 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 CD200P41217 278 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 CDC34P49427 236 aaPredicted RBP11.66□□□□□ -0.54
SMC6-201ENST00000351948 RAB5CP51148 216 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 EWSR1Q01844 656 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMC6-201ENST00000351948 ETFRF1Q6IPR1 90 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 NPY1RP25929 384 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 BAGE2Q86Y30 109 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 DOLPP1Q86YN1 238 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 WBP1Q96G27 269 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 MRPL37Q9BZE1 423 aaKnown RBP11.66□□□□□ -0.54
SMC6-201ENST00000351948 ATPIF1Q9UII2 106 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 PRNDQ9UKY0 176 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 SERTM2A0A1B0GWG4 89 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 WISP1O95388 367 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 IL24Q13007 206 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 C4orf17Q53FE4 359 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 PDZD11Q5EBL8 140 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 CXorf66Q5JRM2 361 aaPredicted RBP11.66□□□□□ -0.54
SMC6-201ENST00000351948 LYZL4Q96KX0 146 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 ASCL3Q9NQ33 180 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 TP53BP1Q12888 1972 aaPredicted RBP11.66□□□□□ -0.54
SMC6-201ENST00000351948 LOC105371242A0A075B767 164 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 SPINK4O60575 86 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 PAQR4Q8N4S7 273 aaPredicted RBP11.66□□□□□ -0.54
SMC6-201ENST00000351948 MDS2Q8NDY4 140 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 ANGPTL6Q8NI99 470 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 PIMREGQ9BSJ6 248 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 NDFIP1Q9BT67 221 aa11.66□□□□□ -0.54
SMC6-201ENST00000351948 ZGRF1Q86YA3 2104 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 GBF1Q92538 1859 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 A0A1W2PPQ1 181 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 PGLYRP1O75594 196 aaPredicted RBP11.65□□□□□ -0.54
SMC6-201ENST00000351948 SLC25A5P05141 298 aaKnown RBP11.65□□□□□ -0.54
SMC6-201ENST00000351948 GAS1P54826 345 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 C1orf162Q8NEQ5 155 aaPredicted RBP11.65□□□□□ -0.54
SMC6-201ENST00000351948 LPAR3Q9UBY5 353 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 KIAA2026Q5HYC2 2103 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 A0A0G2JK05 382 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 GAPDHP04406 335 aaKnown RBP11.65□□□□□ -0.54
SMC6-201ENST00000351948 FAM78BQ5VT40 261 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 ZNF331Q9NQX6 463 aaPredicted RBP11.65□□□□□ -0.54
SMC6-201ENST00000351948 IDI2-AS1Q9NZ38 188 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 TRBV23-1A0A0A0MS06 115 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 IGHV3-48P01763 117 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 KIR2DL2P43627 348 aaPredicted RBP11.65□□□□□ -0.54
SMC6-201ENST00000351948 NDUFA6P56556 154 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 H3F3AP84243 136 aa11.65□□□□□ -0.54
SMC6-201ENST00000351948 ACP7Q6ZNF0 438 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms