RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ZNF841Q6ZN19 808 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 PRSS41Q7RTY9 318 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF695Q8IW36 515 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 RLN3Q8WXF3 142 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 OR1E3Q8WZA6 343 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 UBE2ZQ9H832 354 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 NPVFQ9HCQ7 196 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 MBNL1Q9NR56 388 aaKnown RBP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 RTTNQ86VV8 2226 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 FOXI3A8MTJ6 420 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 SPINK4O60575 86 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 S1PR2O95136 353 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 VENTXO95231 258 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 WISP1O95388 367 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 ADH5P11766 374 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF823P16415 610 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 ARL16Q0P5N6 197 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 IGFBP7Q16270 282 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 BATF2Q8N1L9 274 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 OR10V1Q8NGI7 309 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 KCNS1Q96KK3 526 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 CDX2Q99626 313 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 NAA38Q9BRA0 125 aaKnown RBP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 S1PR5Q9H228 398 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 TAAR3PQ9P1P4 343 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 PSG11Q9UQ72 335 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 C3orf85A0A1B0GTC6 90 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 SLC17A3O00476 420 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF324O75467 553 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 SRSF7Q16629 238 aaKnown RBP eCLIP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 OR2Z1Q8NG97 314 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 OR1K1Q8NGR3 316 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 NEIL1Q96FI4 390 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 WDR61Q9GZS3 305 aaKnown RBP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 DAPP1Q9UN19 280 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 UBE2J1Q9Y385 318 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-203ENST00000349748 IGKV1-9A0A0C4DH69 117 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 C17orf51A8MQB3 221 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 NAPSAO96009 420 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 CA7P43166 264 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 IZUMO4Q1ZYL8 232 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 WDR82Q6UXN9 313 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 OR10P1Q8NGE3 313 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 BORCS7Q96B45 105 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 GUCD1Q96NT3 240 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 CHODLQ9H9P2 273 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 NECAP2Q9NVZ3 263 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 ZNF816-ZNF321PA0A0X1KG74 233 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 C2orf72A6NCS6 295 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 FBLP22087 321 aaKnown RBP9.08□□□□□ -0.96
CAPN3-203ENST00000349748 PEBP1P30086 187 aaKnown RBP9.08□□□□□ -0.96
CAPN3-203ENST00000349748 NTSR1P30989 418 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 WASP42768 502 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 NPBWR2P48146 333 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 ID3Q02535 119 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 ZNF295-AS1Q8N0V1 137 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 OR4A5Q8NH83 315 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 CD207Q9UJ71 328 aa9.08□□□□□ -0.96
CAPN3-203ENST00000349748 TRPM6Q9BX84 2022 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 FAM231BA6NCW3 169 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 NDUFB4O95168 129 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 CISD3P0C7P0 127 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 GDF1P27539 372 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 RPL27P61353 136 aaKnown RBP9.07□□□□□ -0.96
CAPN3-203ENST00000349748 PLCXD3Q63HM9 321 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 POM121L2Q96KW2 1035 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 OR51B2Q9Y5P1 312 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 ATG2BQ96BY7 2078 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 IGKV1D-43A0A0B4J1Z2 117 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 C17orf112F2Z3M2 114 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 MPPED1O15442 326 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 FOXS1O43638 330 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 ZNF207O43670 478 aaKnown RBP9.07□□□□□ -0.96
CAPN3-203ENST00000349748 PMP22Q01453 160 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 TFF2Q03403 129 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 TCEA2Q15560 299 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 C1orf122Q6ZSJ8 110 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 SIGMAR1Q99720 223 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 TMEM222Q9H0R3 208 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 GP6Q9HCN6 339 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 DEC1Q9P2X7 70 aa9.07□□□□□ -0.96
CAPN3-203ENST00000349748 PEF1Q9UBV8 284 aaKnown RBP9.07□□□□□ -0.96
CAPN3-203ENST00000349748 C11orf94C9JXX5 98 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 PNMTP11086 282 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 GNB1P62873 340 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 DPTQ07507 201 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 WDR74Q6RFH5 385 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-203ENST00000349748 SPATA12Q7Z6I5 190 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 SMRP1Q8NCR6 262 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 CRIM1Q9NZV1 1036 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 MDFIC2A0A1B0GVS7 189 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 H0YJW9 148 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 SLC25A17O43808 307 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 B3GALT2O43825 422 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 IAPPP10997 89 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 HLA-DOBP13765 273 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 ZNF17P17021 662 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 RAC3P60763 192 aa9.06□□□□□ -0.96
CAPN3-203ENST00000349748 RUNX3Q13761 415 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms