RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ZNF816Q0VGE8 651 aaPredicted RBP15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 SPINK9Q5DT21 86 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 DPPA3Q6W0C5 159 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 FAM210BQ96KR6 192 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 STRADBQ9C0K7 418 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 WDR61Q9GZS3 305 aaKnown RBP15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 CLDN1O95832 211 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 TRGC1P0CF51 173 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 ERVK11-1P61568 191 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 FBXW9Q5XUX1 488 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 GCNT2Q8N0V5 402 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 OR52L2PQ8NGH6 319 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 GATAD1Q8WUU5 269 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 MBD3L1Q8WWY6 194 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 HIPK2Q9H2X6 1198 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 TMEM9BQ9NQ34 198 aa15.24■□□□□ 0.03
PTP4A3-202ENST00000349124 SLC10A1Q14973 349 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 CLEC12BQ2HXU8 276 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 TMPRSS7Q7RTY8 843 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 TPRX1Q8N7U7 411 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 CLN8Q9UBY8 286 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 TINAGQ9UJW2 476 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 TECTAO75443 2155 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 OR3A1P47881 315 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 SDF2L1Q9HCN8 221 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 SIRT7Q9NRC8 400 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 GAR1Q9NY12 217 aaKnown RBP15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 SPRR3Q9UBC9 169 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 TMEM265A0A087WTH1 108 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 MAP1LC3B2A6NCE7 125 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 LYZL6O75951 148 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 SLC38A11Q08AI6 406 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 BTNL3Q6UXE8 466 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 TAF15Q92804 592 aaKnown RBP eCLIP15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 RTL8AQ9BWD3 113 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 MAP1LC3BQ9GZQ8 125 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 OPA3Q9H6K4 179 aa15.23■□□□□ 0.03
PTP4A3-202ENST00000349124 CXorf65A6NEN9 183 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 PGA5P0DJD9 388 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 PPP1CBP62140 327 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 AESQ08117 197 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 ZNF383Q8NA42 475 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 NECAP1Q8NC96 275 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 SLC25A40Q8TBP6 338 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 NPIPB11E5RHQ5 1161 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 ZNF737O75373 536 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 BRWD1-AS2P59051 145 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 HBG1P69891 147 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 HBG2P69892 147 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 PMP22Q01453 160 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 WDR25Q64LD2 544 aaPredicted RBP15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 ACSM6Q6P461 480 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 LHX4Q969G2 390 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 ZDHHC16Q969W1 377 aa15.22■□□□□ 0.03
PTP4A3-202ENST00000349124 SMPD2O60906 423 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 S100A2P29034 98 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 CD81P60033 236 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 PSG7Q13046 419 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 Q6ZR03 302 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 ZPBPQ9BS86 351 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 OR2D2Q9H210 308 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 SLC25A22Q9H936 323 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 MBNL3Q9NUK0 354 aaKnown RBP15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 SLC39A9Q9NUM3 307 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 LIN7CQ9NUP9 197 aaKnown RBP15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 ABI3Q9P2A4 366 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 FZR1Q9UM11 496 aa15.21■□□□□ 0.03
PTP4A3-202ENST00000349124 MPV17P39210 176 aa15.21■□□□□ 0.02
PTP4A3-202ENST00000349124 IER2Q9BTL4 223 aa15.21■□□□□ 0.02
PTP4A3-202ENST00000349124 LAMA5O15230 3695 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 LNP1A1A4G5 178 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 LRP5LA4QPB2 252 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 CLDN34H7C241 214 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 TNFRSF9Q07011 255 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 TMEM41BQ5BJD5 291 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 OR10G4Q8NGN3 311 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 RFESDQ8TAC1 157 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 RPUSD4Q96CM3 377 aaKnown RBP15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 PLPPR2Q96GM1 343 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 PSMG3Q9BT73 122 aaPredicted RBP15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 DDA1Q9BW61 102 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 VAX2Q9UIW0 290 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 COL27A1Q8IZC6 1860 aaPredicted RBP15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 IGHV3-43A0A0B4J1X8 118 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 C17orf98A8MV24 154 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 DEFB108AA8MXU0 73 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 C12orf77C9JDV5 145 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 SH2D1BO14796 132 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 LY86O95711 162 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 IGHV3-43DP0DP04 118 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 MPLP40238 635 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 TBC1D28Q2M2D7 210 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 HIST3H2BBQ8N257 126 aa15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 COLQQ9Y215 455 aaPredicted RBP15.2■□□□□ 0.02
PTP4A3-202ENST00000349124 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
PTP4A3-202ENST00000349124 S1PR2O95136 353 aa15.19■□□□□ 0.02
PTP4A3-202ENST00000349124 HAND1O96004 215 aa15.19■□□□□ 0.02
PTP4A3-202ENST00000349124 CYB5R3P00387 301 aaPredicted RBP15.19■□□□□ 0.02
PTP4A3-202ENST00000349124 NKX6-1P78426 367 aaPredicted RBP15.19■□□□□ 0.02
PTP4A3-202ENST00000349124 SERF2P84101 59 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms