RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PARP11Q9NR21 331 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 C19orf12Q9NSK7 152 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 IGHV2OR16-5A0A0B4J2B6 119 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 A0A0G2JRQ6 117 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 LRP5LA4QPB2 252 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 PGLYRP1O75594 196 aaPredicted RBP11.73□□□□□ -0.53
TRIM4-201ENST00000349062 FAM87AP0C7U9 286 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 AGAP20933 346 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 S100GP29377 79 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 RAB5CP51148 216 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 UBE2KP61086 200 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 HLA-DRB3P79483 266 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 RUNX1Q01196 453 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 IL24Q13007 206 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 GFI1BQ5VTD9 330 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 MOGAT3Q86VF5 341 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 ABHD14AQ9BUJ0 271 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 KCNIP1Q9NZI2 227 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 TAAR3PQ9P1P4 343 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 NSG2Q9Y328 171 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 ANKHD1Q8IWZ3 2542 aaKnown RBP11.72□□□□□ -0.53
TRIM4-201ENST00000349062 TAAR5O14804 337 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 RAC2P15153 192 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 SNCAP37840 140 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 ZNF474Q6S9Z5 364 aaPredicted RBP11.72□□□□□ -0.53
TRIM4-201ENST00000349062 ZNRF1Q8ND25 227 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 NINJ1Q92982 152 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 TMEM222Q9H0R3 208 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 WFDC1Q9HC57 220 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 OR2W1Q9Y3N9 320 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 SPG11Q96JI7 2443 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 OR5H1A6NKK0 313 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 CHST1O43916 411 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 IGHV2-70P01814 119 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 CRYAAP02489 173 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 COL10A1Q03692 680 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 MSMPQ1L6U9 139 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 PYY3Q5JQD4 70 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 OR2D2Q9H210 308 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 GP6Q9HCN6 339 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 PIEZO1Q92508 2521 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 CACNA1BQ00975 2339 aa11.72□□□□□ -0.53
TRIM4-201ENST00000349062 PLA2G5P39877 138 aa11.71□□□□□ -0.53
TRIM4-201ENST00000349062 OR8G5Q8NG78 346 aa11.71□□□□□ -0.53
TRIM4-201ENST00000349062 GPR61Q9BZJ8 451 aa11.71□□□□□ -0.53
TRIM4-201ENST00000349062 GAR1Q9NY12 217 aaKnown RBP11.71□□□□□ -0.53
TRIM4-201ENST00000349062 CACNG5Q9UF02 275 aa11.71□□□□□ -0.53
TRIM4-201ENST00000349062 E5RGE8 158 aa11.71□□□□□ -0.53
TRIM4-201ENST00000349062 CYB5BO43169 146 aa11.71□□□□□ -0.53
TRIM4-201ENST00000349062 FIP1L1Q6UN15 594 aaKnown RBP11.71□□□□□ -0.53
TRIM4-201ENST00000349062 SELENOHQ8IZQ5 122 aaKnown RBP11.71□□□□□ -0.53
TRIM4-201ENST00000349062 RBMXL3Q8N7X1 1067 aaKnown RBP11.71□□□□□ -0.53
TRIM4-201ENST00000349062 PBDC1Q9BVG4 233 aa11.71□□□□□ -0.53
TRIM4-201ENST00000349062 SLC35B3Q9H1N7 401 aa11.71□□□□□ -0.53
TRIM4-201ENST00000349062 PLK3Q9H4B4 646 aa11.71□□□□□ -0.53
TRIM4-201ENST00000349062 DOK5Q9P104 306 aa11.71□□□□□ -0.53
TRIM4-201ENST00000349062 MKRN2OSH3BPM6 223 aa11.71□□□□□ -0.54
TRIM4-201ENST00000349062 ST8SIA5O15466 376 aa11.71□□□□□ -0.54
TRIM4-201ENST00000349062 CLEC12BQ2HXU8 276 aa11.71□□□□□ -0.54
TRIM4-201ENST00000349062 PCSK4Q6UW60 755 aa11.71□□□□□ -0.54
TRIM4-201ENST00000349062 TGIF2LYQ8IUE0 185 aa11.71□□□□□ -0.54
TRIM4-201ENST00000349062 UBAC2Q8NBM4 344 aa11.71□□□□□ -0.54
TRIM4-201ENST00000349062 OPA3Q9H6K4 179 aa11.71□□□□□ -0.54
TRIM4-201ENST00000349062 FABP4P15090 132 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 CCL20P78556 96 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 Q6P435 159 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 OR5C1Q8NGR4 320 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 PSG11Q9UQ72 335 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 FAM215AQ9Y5M1 114 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 CCL8P80075 99 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 OR8G2PQ6IF36 304 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 OR2G3Q8NGZ4 309 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 OR2V2Q96R30 315 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 GLRX2Q9NS18 164 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 GNG12Q9UBI6 72 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 ZDHHC8Q9ULC8 765 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 AHRRA9YTQ3 701 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 GPX4P36969 197 aaPredicted RBP11.7□□□□□ -0.54
TRIM4-201ENST00000349062 HMGN3Q15651 99 aa11.7□□□□□ -0.54
TRIM4-201ENST00000349062 SEBOXQ9HB31 216 aaPredicted RBP11.7□□□□□ -0.54
TRIM4-201ENST00000349062 METTL15P1P0C7V9 234 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 PGA5P0DJD9 388 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 FOLR2P14207 255 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 EGR1P18146 543 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 RPS23P62266 143 aaKnown RBP11.69□□□□□ -0.54
TRIM4-201ENST00000349062 RHEBQ15382 184 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 SPANXN5Q5MJ07 72 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 GFRALQ6UXV0 394 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 SPNS3Q6ZMD2 512 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 OR2C3Q8N628 320 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 C18orf12Q96KH6 178 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 DCAF16Q9NXF7 216 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 PTPRBP23467 1997 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 C12orf77C9JDV5 145 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 F2RP25116 425 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 ERVFRD-1P60508 538 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 NKX6-1P78426 367 aaPredicted RBP11.69□□□□□ -0.54
TRIM4-201ENST00000349062 EWSR1Q01844 656 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRIM4-201ENST00000349062 WDR82Q6UXN9 313 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms