RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 PINX1Q96BK5 328 aaKnown RBP15.86■□□□□ 0.13
SCARF1-202ENST00000348987 YPEL2Q96QA6 119 aa15.86■□□□□ 0.13
SCARF1-202ENST00000348987 TMEM265A0A087WTH1 108 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 H0Y980 276 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 TPTE2P1Q5T6R2 138 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 OR1K1Q8NGR3 316 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 EXTL1Q92935 676 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 IMMP2LQ96T52 175 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 PXMP4Q9Y6I8 212 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 ASPMQ8IZT6 3477 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 UBE2L5PA0A1B0GUS4 154 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 TCF23Q7RTU1 214 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 C11orf42Q8N5U0 333 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 CMTM2Q8TAZ6 248 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 PILRBQ9UKJ0 227 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 AHCTF1Q8WYP5 2266 aa15.85■□□□□ 0.13
SCARF1-202ENST00000348987 LOC102723996A0A087X1L8 192 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 HSPB6O14558 160 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 SYNGR2O43760 224 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 PSG2P11465 335 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 CDKN1AP38936 164 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 LCN2P80188 198 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 PRDX4Q13162 271 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 RNPS1Q15287 305 aaKnown RBP15.84■□□□□ 0.13
SCARF1-202ENST00000348987 TEX43Q6ZNM6 134 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 IFI44Q8TCB0 444 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 C1QTNF9BB2RNN3 333 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 F2RP25116 425 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 FBXW9Q5XUX1 488 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 PMS2CLQ68D20 193 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 FOXL2NBQ6ZUU3 175 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 YRDCQ86U90 279 aaKnown RBP15.84■□□□□ 0.13
SCARF1-202ENST00000348987 OR10V1Q8NGI7 309 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 TAF15Q92804 592 aaKnown RBP eCLIP15.84■□□□□ 0.13
SCARF1-202ENST00000348987 WDYHV1Q96HA8 205 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 ALKBH3Q96Q83 286 aaPredicted RBP15.84■□□□□ 0.13
SCARF1-202ENST00000348987 CACNG5Q9UF02 275 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 PPIAL4AQ9Y536 164 aa15.84■□□□□ 0.13
SCARF1-202ENST00000348987 SERPINE2P07093 398 aa15.83■□□□□ 0.13
SCARF1-202ENST00000348987 DSCR4P56555 118 aaPredicted RBP15.83■□□□□ 0.13
SCARF1-202ENST00000348987 MLF1P58340 268 aa15.83■□□□□ 0.13
SCARF1-202ENST00000348987 HBG1P69891 147 aa15.83■□□□□ 0.13
SCARF1-202ENST00000348987 HBG2P69892 147 aa15.83■□□□□ 0.13
SCARF1-202ENST00000348987 SPANXN5Q5MJ07 72 aa15.83■□□□□ 0.13
SCARF1-202ENST00000348987 NUFIP2Q7Z417 695 aaKnown RBP15.83■□□□□ 0.13
SCARF1-202ENST00000348987 VN1R17PQ8TDU5 208 aa15.83■□□□□ 0.13
SCARF1-202ENST00000348987 ZFP30Q9Y2G7 519 aa15.83■□□□□ 0.13
SCARF1-202ENST00000348987 ZNHIT1O43257 154 aa15.83■□□□□ 0.12
SCARF1-202ENST00000348987 RAB7AP51149 207 aa15.83■□□□□ 0.12
SCARF1-202ENST00000348987 URB1O60287 2271 aaKnown RBP15.83■□□□□ 0.12
SCARF1-202ENST00000348987 IGKV1-6A0A0C4DH72 117 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 B4GALT1P15291 398 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 CRYGSP22914 178 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 FKBP2P26885 142 aaKnown RBP15.82■□□□□ 0.12
SCARF1-202ENST00000348987 ADMP35318 185 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 TMEM183BQ1AE95 376 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 ACSM6Q6P461 480 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 PIGCQ92535 297 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 VAMP8Q9BV40 100 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 PAGE4O60829 102 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 TRAPPC6AO75865 159 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 EGR1P18146 543 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 SSR4P51571 173 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 COL5A1-AS1Q5SY13 56 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 FAM27BQ5VT28 67 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 GUCD1Q96NT3 240 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 WDR54Q9H977 334 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 PATZ1Q9HBE1 687 aaKnown RBP15.82■□□□□ 0.12
SCARF1-202ENST00000348987 FOXJ2Q9P0K8 574 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 DOCK11Q5JSL3 2073 aa15.82■□□□□ 0.12
SCARF1-202ENST00000348987 TUSC2O75896 110 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 NPPCP23582 126 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 PPP1CBP62140 327 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 PLCXD3Q63HM9 321 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 OR8G2PQ6IF36 304 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 RPS19BP1Q86WX3 136 aaKnown RBP15.81■□□□□ 0.12
SCARF1-202ENST00000348987 FGFBP3Q8TAT2 258 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 RNASE8Q8TDE3 154 aaKnown RBP15.81■□□□□ 0.12
SCARF1-202ENST00000348987 IL36GQ9NZH8 169 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 VAMP5O95183 116 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 CHRNB4P30926 498 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 UBE2NP61088 152 aaKnown RBP15.81■□□□□ 0.12
SCARF1-202ENST00000348987 ZDHHC23Q8IYP9 409 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 ZNF611Q8N823 705 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 HSPB9Q9BQS6 159 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 OR51B6Q9H340 312 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 SH2D2AQ9NP31 389 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 TP53TG3Q9ULZ0 132 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 SYNGR3O43761 229 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 FUT6P51993 359 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 SOX8P57073 446 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 RPP30P78346 268 aaKnown RBP15.81■□□□□ 0.12
SCARF1-202ENST00000348987 TMEM144Q7Z5S9 345 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 TMEM9BQ9NQ34 198 aa15.81■□□□□ 0.12
SCARF1-202ENST00000348987 VENTXO95231 258 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 RFPL3SP0C7P2 107 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 DEFA4P12838 97 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 RAC1P63000 192 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 MMDQ15546 238 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 TMEM42Q69YG0 159 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms