RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 OVCH2Q7RTZ1 564 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 ZNF561Q8N587 486 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 FLVCR1-AS1Q8TAF5 88 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 GPHA2Q96T91 129 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 ASCL3Q9NQ33 180 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 WASHC3Q9Y3C0 194 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 TRAV20A0A0B4J274 112 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 ZG16O60844 167 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 CD40P25942 277 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 NBL1P41271 181 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 COL10A1Q03692 680 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 MESP1Q9BRJ9 268 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 ALX4Q9H161 411 aaPredicted RBP9.37□□□□□ -0.91
CLCN6-202ENST00000346436 ZNF727A8MUV8 499 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 C1QL1O75973 258 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 FGF8P55075 233 aaPredicted RBP9.37□□□□□ -0.91
CLCN6-202ENST00000346436 IL13RA2Q14627 380 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 FAM209BQ5JX69 171 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 OR2T10Q8NGZ9 312 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 OR10C1Q96KK4 312 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 TMED3Q9Y3Q3 217 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 SYNGR1O43759 233 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 ATRAIDQ6UW56 229 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 OR10A7Q8NGE5 316 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 OR9G1Q8NH87 305 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 RAB5AP20339 215 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 PAX5Q02548 391 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 TM4SF20Q53R12 229 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 TMEM41BQ5BJD5 291 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 SPINK9Q5DT21 86 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 NCMAPQ5T1S8 102 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 ZNF426Q9BUY5 554 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 ABCA7Q8IZY2 2146 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 SLC25A4P12235 298 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 MUC1P15941 1255 aaPredicted RBP9.36□□□□□ -0.91
CLCN6-202ENST00000346436 ATP6V1FQ16864 119 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 ZNF429Q86V71 674 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 ABHD14AQ9BUJ0 271 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 RNF122Q9H9V4 155 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 CYB5R1Q9UHQ9 305 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 RTTNQ86VV8 2226 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 ZDBF2Q9HCK1 2354 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 NPIPB9F8W1W9 429 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 SLC25A16P16260 332 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 SRD5A1P18405 259 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 ZNF343Q6P1L6 599 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 LINC00114Q6XXX2 140 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 BMPERQ8N8U9 685 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 STXBP6Q8NFX7 210 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 ZNF703Q9H7S9 590 aaPredicted RBP9.36□□□□□ -0.91
CLCN6-202ENST00000346436 LHFPL6Q9Y693 200 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 PLXND1Q9Y4D7 1925 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 UBE2L5PA0A1B0GUS4 154 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 LOC105371267A0A1B0GV96 52 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 FSTP19883 344 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 VDAC2P45880 294 aaPredicted RBP9.36□□□□□ -0.91
CLCN6-202ENST00000346436 OR10J6PQ8NGY7 276 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 AQP3Q92482 292 aa9.36□□□□□ -0.91
CLCN6-202ENST00000346436 hCG_38984A0A1B0GV85 526 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 IL18BPO95998 194 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 NAT2P11245 290 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 AREGP15514 252 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 ORM2P19652 201 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 OR2C3Q8N628 320 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 OR4A5Q8NH83 315 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 FAM206AQ9NX38 181 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 SDK2Q58EX2 2172 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 HIST1H1BP16401 226 aaKnown RBP9.35□□□□□ -0.91
CLCN6-202ENST00000346436 NHLH2Q02577 135 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 RELQ04864 619 aaPredicted RBP9.35□□□□□ -0.91
CLCN6-202ENST00000346436 ZNF345Q14585 488 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 ACSF3Q4G176 576 aaPredicted RBP9.35□□□□□ -0.91
CLCN6-202ENST00000346436 BAGE3Q86Y29 109 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 BAGE2Q86Y30 109 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 OR1B1Q8NGR6 318 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 FNDC1Q4ZHG4 1894 aaPredicted RBP9.35□□□□□ -0.91
CLCN6-202ENST00000346436 RAMP1O60894 148 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 OR2J3O76001 311 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 CTSDP07339 412 aaPredicted RBP9.35□□□□□ -0.91
CLCN6-202ENST00000346436 FAM3AP98173 230 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 FAM27E3Q08E93 113 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 SP5Q6BEB4 398 aaPredicted RBP9.35□□□□□ -0.91
CLCN6-202ENST00000346436 HOGA1Q86XE5 327 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 SYT8Q8NBV8 401 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 EEF1AKMT3Q96AZ1 226 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 TLNRD1Q9H1K6 362 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 SH2D2AQ9NP31 389 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 METTL1Q9UBP6 276 aaKnown RBP9.35□□□□□ -0.91
CLCN6-202ENST00000346436 THSD7BQ9C0I4 1608 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 IGHV3-13P01766 116 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 IGHV3-7P01780 117 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 BCL3P20749 454 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 SNRPD3P62318 126 aaKnown RBP9.35□□□□□ -0.91
CLCN6-202ENST00000346436 TBC1D26Q86UD7 250 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 SIRT7Q9NRC8 400 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 SLC2A9Q9NRM0 540 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 YTHDF2Q9Y5A9 579 aaKnown RBP9.35□□□□□ -0.91
CLCN6-202ENST00000346436 GBF1Q92538 1859 aa9.35□□□□□ -0.91
CLCN6-202ENST00000346436 BMPR1BO00238 502 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 SLC31A2O15432 143 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms