RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 MPPED1O15442 326 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 PHF1O43189 567 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 NMBP08949 121 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 OR3A1P47881 315 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 RPS23P62266 143 aaKnown RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 AESQ08117 197 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 SMIM21Q3B7S5 101 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 GGNBP1Q5YKI7 109 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 LYZL2Q7Z4W2 148 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 H1FOOQ8IZA3 346 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 CD177Q8N6Q3 437 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 OR10J5Q8NHC4 309 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 THAP6Q8TBB0 222 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 MSI2Q96DH6 328 aaKnown RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 WFIKKN1Q96NZ8 548 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 TP53RKQ96S44 253 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 CABLES2Q9BTV7 478 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 CCL28Q9NRJ3 127 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 METTL1Q9UBP6 276 aaKnown RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 KCNIP3Q9Y2W7 256 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 WIPI2Q9Y4P8 454 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 RNF222A6NCQ9 220 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 C5orf52A6NGY3 159 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 MARCH11A6NNE9 402 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 RP2O75695 350 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 HEXAP06865 529 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 SPP1P10451 314 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 MUC1P15941 1255 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 CASP6P55212 293 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 RPP30P78346 268 aaKnown RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 CYCSP99999 105 aaKnown RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 IL15RAQ13261 267 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 RAB32Q13637 225 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 IAH1Q2TAA2 248 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 DHRS7BQ6IAN0 325 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 ATRAIDQ6UW56 229 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 MOB1BQ7L9L4 216 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 TBC1D26Q86UD7 250 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 GCSAMQ8N6F7 178 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 CCDC71LQ8N9Z2 235 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 NUP37Q8NFH4 326 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 PPP1R35Q8TAP8 253 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 SCARB1Q8WTV0 552 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 COQ2Q96H96 371 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 C14orf144Q96I85 54 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 PARP12Q9H0J9 701 aaKnown RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 TAF9BQ9HBM6 251 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 OR5AC2Q9NZP5 309 aa7.72□□□□□ -1.17
ATG4A-202ENST00000345734 ERRFI1Q9UJM3 462 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-202ENST00000345734 RAI1Q7Z5J4 1906 aaPredicted RBP7.71□□□□□ -1.17
ATG4A-202ENST00000345734 TMEM30CPA0ZSE6 113 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 MEX3AA1L020 520 aaKnown RBP7.71□□□□□ -1.18
ATG4A-202ENST00000345734 SRRM5B3KS81 715 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 H7C1Q1 480 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 GPR31O00270 319 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 TNFSF12O43508 249 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 IGHV1-46P01743 117 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 PSG2P11465 335 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 PRDX2P32119 198 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 CA7P43166 264 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 CD81P60033 236 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 HMGN3Q15651 99 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 FAM201AQ5SY85 155 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 FAM53AQ6NSI3 398 aaPredicted RBP7.71□□□□□ -1.18
ATG4A-202ENST00000345734 ADAM5Q6NVV9 412 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 TEPPQ6URK8 271 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 MEX3BQ6ZN04 569 aaKnown RBP7.71□□□□□ -1.18
ATG4A-202ENST00000345734 ACOT7LQ6ZUV0 252 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 SPAG16Q8N0X2 631 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 KCNRGQ8N5I3 272 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 TPRX1Q8N7U7 411 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 OR1L1Q8NH94 360 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 DCUN1D4Q92564 292 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 RRNAD1Q96FB5 475 aaKnown RBP7.71□□□□□ -1.18
ATG4A-202ENST00000345734 C18orf12Q96KH6 178 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 SUCNR1Q9BXA5 334 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 OR2W1Q9Y3N9 320 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 USF3Q68DE3 2245 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 PKD1L2Q7Z442 2459 aa7.71□□□□□ -1.18
ATG4A-202ENST00000345734 ANKHD1Q8IWZ3 2542 aaKnown RBP7.7□□□□□ -1.18
ATG4A-202ENST00000345734 IGKV1D-17A0A075B6S4 117 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 C3orf85A0A1B0GTC6 90 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 IFNL4K9M1U5 179 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 NDUFB7P17568 137 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 SELENOVP59797 346 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 S100A10P60903 97 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 TMEM95Q3KNT9 176 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 SLC35E4Q6ICL7 350 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 FOXRED2Q8IWF2 684 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 LRTM2Q8N967 370 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 ST6GALNAC3Q8NDV1 305 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 ZCCHC14Q8WYQ9 949 aaKnown RBP7.7□□□□□ -1.18
ATG4A-202ENST00000345734 DSCAML1Q8TD84 2053 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 A0A0D9SG52 128 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 C12orf77C9JDV5 145 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 NPIPB11E5RHQ5 1161 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 CCL21O00585 134 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 OR2F2O95006 317 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 LHBP01229 141 aa7.7□□□□□ -1.18
ATG4A-202ENST00000345734 IFNA21P01568 189 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms