RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 OR1L1Q8NH94 360 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 RPP25Q9BUL9 199 aaKnown RBP15.11■□□□□ 0.01
SPAST-202ENST00000345662 HEXA-AS1Q9H8Q6 139 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 J3QR06 171 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 SPEM1Q8N4L4 309 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 GALNT14Q96FL9 552 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 TRAV38-1A0A0B4J264 116 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 THY1P04216 161 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 TRA2AQ13595 282 aaKnown RBP eCLIP15.11■□□□□ 0.01
SPAST-202ENST00000345662 THYN1Q9P016 225 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 TINAGQ9UJW2 476 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 COL4A1P02462 1669 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 A0A1B0GTI1 187 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 ZNF83P51522 516 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 OR8B3Q8NGG8 313 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 MYOZ3Q8TDC0 251 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 Q96M66 194 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 MARF1Q9Y4F3 1742 aaKnown RBP15.1■□□□□ 0.01
SPAST-202ENST00000345662 IGKV1D-42A0A075B6H8 117 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 C4orf51C9J302 202 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 F5H697 171 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 H3BVH4 76 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 Q8WTZ3 238 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 SFRP2Q96HF1 295 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 PILRAQ9UKJ1 303 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 OR4C46A6NHA9 309 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 ERVFRD-1P60508 538 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 GAB4Q2WGN9 574 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 BIVMQ86UB2 503 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 TUSC5Q8IXB3 177 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 MEOX1P50221 254 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 COL10A1Q03692 680 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 WDR74Q6RFH5 385 aaPredicted RBP15.1■□□□□ 0.01
SPAST-202ENST00000345662 FGFRL1Q8N441 504 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 ZNF488Q96MN9 340 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 MRPL37Q9BZE1 423 aaKnown RBP15.1■□□□□ 0.01
SPAST-202ENST00000345662 DNAJC4Q9NNZ3 241 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 KLF3P57682 345 aaPredicted RBP15.1■□□□□ 0.01
SPAST-202ENST00000345662 TNFAIP6P98066 277 aaPredicted RBP15.1■□□□□ 0.01
SPAST-202ENST00000345662 CEACAM21Q3KPI0 293 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 PQLC2Q6ZP29 291 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 GBGT1Q8N5D6 347 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 FAM216AQ8WUB2 273 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 RPRMQ9NS64 109 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 LHFPL6Q9Y693 200 aa15.1■□□□□ 0.01
SPAST-202ENST00000345662 MMD2Q8IY49 270 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 NFAM1Q8NET5 270 aaPredicted RBP15.09■□□□□ 0.01
SPAST-202ENST00000345662 APOBEC4Q8WW27 367 aaKnown RBP15.09■□□□□ 0.01
SPAST-202ENST00000345662 SMIM12Q96EX1 92 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 AP5S1Q9NUS5 200 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 CLDN18P56856 261 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 SRSF3P84103 164 aaKnown RBP15.09■□□□□ 0.01
SPAST-202ENST00000345662 KIAA1644Q3SXP7 199 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 FHL5Q5TD97 284 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 SLC25A47Q6Q0C1 308 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 SEC16AO15027 2179 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 SPINT1O43278 529 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 FGF16O43320 207 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 ORM1P02763 201 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 OR1L8Q8NGR8 309 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 ZCCHC14Q8WYQ9 949 aaKnown RBP15.09■□□□□ 0.01
SPAST-202ENST00000345662 ZNFX1Q9P2E3 1918 aaKnown RBP15.09■□□□□ 0.01
SPAST-202ENST00000345662 TSPAN2O60636 221 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 TCTAP57738 103 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 ADAMTSL1Q8N6G6 1762 aa15.09■□□□□ 0.01
SPAST-202ENST00000345662 KLF7O75840 302 aaPredicted RBP15.08■□□□□ 0.01
SPAST-202ENST00000345662 ADRA2AP08913 450 aa15.08■□□□□ 0.01
SPAST-202ENST00000345662 RPL30P62888 115 aaKnown RBP15.08■□□□□ 0.01
SPAST-202ENST00000345662 CYP2G1PQ6ZSU1 146 aa15.08■□□□□ 0.01
SPAST-202ENST00000345662 TGIF2LYQ8IUE0 185 aa15.08■□□□□ 0.01
SPAST-202ENST00000345662 ATOH7Q8N100 152 aa15.08■□□□□ 0.01
SPAST-202ENST00000345662 OR51B2Q9Y5P1 312 aa15.08■□□□□ 0.01
SPAST-202ENST00000345662 DPRXA6NFQ7 191 aa15.08■□□□□ 0
SPAST-202ENST00000345662 TMEM210A6NLX4 147 aa15.08■□□□□ 0
SPAST-202ENST00000345662 MIC13Q5XKP0 118 aa15.08■□□□□ 0
SPAST-202ENST00000345662 OR5R1Q8NH85 324 aa15.08■□□□□ 0
SPAST-202ENST00000345662 HLA-DRB1P01911 266 aa15.08■□□□□ 0
SPAST-202ENST00000345662 HARBI1Q96MB7 349 aa15.08■□□□□ 0
SPAST-202ENST00000345662 RAMP1O60894 148 aa15.08■□□□□ 0
SPAST-202ENST00000345662 CCL3P10147 92 aa15.08■□□□□ 0
SPAST-202ENST00000345662 CEBPDP49716 269 aaPredicted RBP15.08■□□□□ 0
SPAST-202ENST00000345662 PRRX1P54821 245 aa15.08■□□□□ 0
SPAST-202ENST00000345662 NXPH1P58417 271 aa15.08■□□□□ 0
SPAST-202ENST00000345662 LY6G6FQ5SQ64 297 aa15.08■□□□□ 0
SPAST-202ENST00000345662 LSM10Q969L4 123 aaKnown RBP15.08■□□□□ 0
SPAST-202ENST00000345662 RCC1LQ96I51 464 aaKnown RBP15.08■□□□□ 0
SPAST-202ENST00000345662 GPHA2Q96T91 129 aa15.08■□□□□ 0
SPAST-202ENST00000345662 OPN3Q9H1Y3 402 aaPredicted RBP15.08■□□□□ 0
SPAST-202ENST00000345662 K7EQS6 105 aa15.07■□□□□ 0
SPAST-202ENST00000345662 PSG4Q00888 419 aa15.07■□□□□ 0
SPAST-202ENST00000345662 TNFRSF9Q07011 255 aa15.07■□□□□ 0
SPAST-202ENST00000345662 UNC119Q13432 240 aa15.07■□□□□ 0
SPAST-202ENST00000345662 SNRNP40Q96DI7 357 aaKnown RBP15.07■□□□□ 0
SPAST-202ENST00000345662 LOC389332A0A1B0GUA5 103 aa15.07■□□□□ 0
SPAST-202ENST00000345662 MS4A18H0YCH9 400 aa15.07■□□□□ 0
SPAST-202ENST00000345662 LIFP15018 202 aa15.07■□□□□ 0
SPAST-202ENST00000345662 CD40P25942 277 aa15.07■□□□□ 0
SPAST-202ENST00000345662 MS4A18Q3C1V0 323 aa15.07■□□□□ 0
SPAST-202ENST00000345662 HES3Q5TGS1 186 aa15.07■□□□□ 0
SPAST-202ENST00000345662 SPSB4Q96A44 273 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms