RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 GBGT1Q8N5D6 347 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 HIST1H4GQ99525 98 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 CDX2Q99626 313 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-202ENST00000345356 RNF122Q9H9V4 155 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 CCDC88CQ9P219 2028 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 MARCH11A6NNE9 402 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 SFTPCP11686 197 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 MRPS11P82912 194 aaKnown RBP10.48□□□□□ -0.73
COL12A1-202ENST00000345356 LRRC29Q8WV35 223 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 PERPQ96FX8 193 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 SARGQ9BW04 601 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 SEBOXQ9HB31 216 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-202ENST00000345356 LHX9Q9NQ69 397 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 CDK5RAP2Q96SN8 1893 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 IGLV1-36A0A0B4J1U3 117 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 ORM1P02763 201 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 SMIM13P0DJ93 91 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 LSM10Q969L4 123 aaKnown RBP10.48□□□□□ -0.73
COL12A1-202ENST00000345356 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 MMP17Q9ULZ9 603 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 ALS2Q96Q42 1657 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM14DPA8MWL7 114 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 GNG7O60262 68 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 DXOO77932 396 aaKnown RBP10.48□□□□□ -0.73
COL12A1-202ENST00000345356 CISD3P0C7P0 127 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 STXBP6Q8NFX7 210 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 ELSPBP1Q96BH3 223 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 PSMG3Q9BT73 122 aaPredicted RBP10.48□□□□□ -0.73
COL12A1-202ENST00000345356 TWSG1Q9GZX9 223 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM106BQ9NUM4 274 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 FZR1Q9UM11 496 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 DLX1P56177 255 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 ANKRD37Q7Z713 158 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 A1L4Q6 167 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 SERF1AO75920 110 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 MT-CO3P00414 261 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 CD5P06127 495 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 ZNF841Q6ZN19 808 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 SNAI2O43623 268 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 AMBPP02760 352 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 LINC00869P0C866 280 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 IZUMO4Q1ZYL8 232 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 ZXDCQ2QGD7 858 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-202ENST00000345356 PRNTQ86SH4 94 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 C1QL4Q86Z23 238 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 PGLYRP4Q96LB8 373 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 ITGB4P16144 1822 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 SCN4AP35499 1836 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 POU2F2P09086 479 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 CXCL1P09341 107 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 OR2M3Q8NG83 312 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 FOXD3Q9UJU5 478 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-202ENST00000345356 SPCS1Q9Y6A9 102 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 A0A0U1RQV5 110 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 A0A1W2PPC4 97 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 CDIPTO14735 213 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 KLF4O43474 513 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 IL11P20809 199 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 CRYBB3P26998 211 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 ICAM4Q14773 271 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 PLA2G3Q9NZ20 509 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 ARFGEF1Q9Y6D6 1849 aa10.47□□□□□ -0.73
COL12A1-202ENST00000345356 ACP1P24666 158 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 MMDQ15546 238 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 RIPPLY2Q5TAB7 128 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 OR2H1Q9GZK4 316 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 MEGF9Q9H1U4 602 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 G6PC2Q9NQR9 355 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 PRNDQ9UKY0 176 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 KLF13Q9Y2Y9 288 aaPredicted RBP10.46□□□□□ -0.73
COL12A1-202ENST00000345356 M0R3E3 92 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 MYF5P13349 255 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 SPSB4Q96A44 273 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 KCNS1Q96KK3 526 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 MIA3Q5JRA6 1907 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 H0YIZ8 118 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 FAM19A2Q8N3H0 131 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 BEND2Q8NDZ0 799 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 RTBDNQ9BSG5 229 aaPredicted RBP10.46□□□□□ -0.73
COL12A1-202ENST00000345356 SMOC1Q9H4F8 434 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 PRDM13Q9H4Q3 707 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 FAM206AQ9NX38 181 aa10.46□□□□□ -0.73
COL12A1-202ENST00000345356 H7C2G1 150 aa10.46□□□□□ -0.74
COL12A1-202ENST00000345356 SLC17A3O00476 420 aa10.46□□□□□ -0.74
COL12A1-202ENST00000345356 PEBP1P30086 187 aaKnown RBP10.46□□□□□ -0.74
COL12A1-202ENST00000345356 ZNF488Q96MN9 340 aa10.46□□□□□ -0.74
COL12A1-202ENST00000345356 CLEC5AQ9NY25 188 aa10.46□□□□□ -0.74
COL12A1-202ENST00000345356 PROCRQ9UNN8 238 aa10.46□□□□□ -0.74
COL12A1-202ENST00000345356 LINC00596Q86U02 117 aa10.46□□□□□ -0.74
COL12A1-202ENST00000345356 FGFRL1Q8N441 504 aa10.46□□□□□ -0.74
COL12A1-202ENST00000345356 OR10AG1Q8NH19 301 aa10.46□□□□□ -0.74
COL12A1-202ENST00000345356 SLC25A17O43808 307 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 THY1P04216 161 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 DRD3P35462 400 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 UNC119Q13432 240 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 C6orf15Q6UXA7 325 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-202ENST00000345356 ZNF502Q8TBZ5 544 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 IL36BQ9NZH7 164 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 ZNF646O15015 1829 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-202ENST00000345356 IGKV1-8A0A0C4DH67 115 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms