RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 QRFPP83859 136 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 TPBGQ13641 420 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 PLGLAQ15195 96 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 C11orf87Q6NUJ2 197 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 TMEM91Q6ZNR0 172 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 ZNF833PQ6ZTB9 187 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 SVOPQ8N4V2 548 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 ABHD5Q8WTS1 349 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 RITA1Q96K30 269 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 CNBD2Q96M20 576 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 HDHD3Q9BSH5 251 aaPredicted RBP9.72□□□□□ -0.85
SGCA-202ENST00000344627 ANKRD60Q9BZ19 345 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 LPAR5Q9H1C0 372 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 Q9H521 79 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 DUSP21Q9H596 190 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 PIPOXQ9P0Z9 390 aa9.72□□□□□ -0.85
SGCA-202ENST00000344627 C3orf84H3BNL1 204 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 H7C2Y5 167 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 NBR2O15453 112 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 IGHG4P01861 327 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 IGF1P05019 195 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 CPEP16870 476 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 PSMA1P25786 263 aaKnown RBP9.71□□□□□ -0.86
SGCA-202ENST00000344627 CEACAM6P40199 344 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 CLDN12P56749 244 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 MLLT11Q13015 90 aaPredicted RBP9.71□□□□□ -0.86
SGCA-202ENST00000344627 RPL39P5Q59GN2 51 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 LY6G6FQ5SQ64 297 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 LIN54Q6MZP7 749 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 FAM131AQ6UXB0 335 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 GLDNQ6ZMI3 551 aaPredicted RBP9.71□□□□□ -0.86
SGCA-202ENST00000344627 MOB1BQ7L9L4 216 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 ARHGAP5-AS1Q96IT6 56 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 ABHD14BQ96IU4 210 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 MGLLQ99685 303 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 IFI27L2Q9H2X8 130 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 OR51J1Q9H342 316 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 RIMS4Q9H426 269 aaPredicted RBP9.71□□□□□ -0.86
SGCA-202ENST00000344627 ISYNA1Q9NPH2 558 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 RNF150Q9ULK6 438 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 U3KQK5 164 aa9.71□□□□□ -0.86
SGCA-202ENST00000344627 G3V318 75 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 ATP6V0E1O15342 81 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 NAPSAO96009 420 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 CRHBPP24387 322 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 RANBP1P43487 201 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 HLA-DRB3P79483 266 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 MRPS15P82914 257 aaKnown RBP9.7□□□□□ -0.86
SGCA-202ENST00000344627 FABP5Q01469 135 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 C5orf64Q2M2E5 130 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 HES5Q5TA89 166 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 ZNF880Q6PDB4 577 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 PRSS48Q7RTY5 328 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 C4orf3Q8WVX3 66 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 FAM3DQ96BQ1 224 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 OR5B12Q96R08 314 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 GFI1Q99684 422 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 CMSS1Q9BQ75 279 aaKnown RBP9.7□□□□□ -0.86
SGCA-202ENST00000344627 OR1A1Q9P1Q5 309 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 MGAT4AQ9UM21 535 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 LSM4Q9Y4Z0 139 aaKnown RBP9.7□□□□□ -0.86
SGCA-202ENST00000344627 A3GALT2U3KPV4 340 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 V9GY05 133 aa9.7□□□□□ -0.86
SGCA-202ENST00000344627 TRAV41A0A0B4J266 112 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 DENRO43583 198 aaKnown RBP9.69□□□□□ -0.86
SGCA-202ENST00000344627 HLA-DRB1P01911 266 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 SCTP09683 121 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 CD37P11049 281 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 ZBTB25P24278 435 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 PSMB8P28062 276 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 PSMD7P51665 324 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 CFHR3Q02985 330 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 ECSCRQ19T08 205 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 C2orf76Q3KRA6 126 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 FAM71F2Q6NXP2 309 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 IZUMO2Q6UXV1 221 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 FAM89BQ8N5H3 189 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 OR56B1Q8NGI3 324 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 EDARADDQ8WWZ3 215 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 CLCC1Q96S66 551 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 PECRQ9BY49 303 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 PARP12Q9H0J9 701 aaKnown RBP9.69□□□□□ -0.86
SGCA-202ENST00000344627 C11orf54Q9H0W9 315 aaPredicted RBP9.69□□□□□ -0.86
SGCA-202ENST00000344627 KLK15Q9H2R5 256 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 FBXL15Q9H469 300 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 ACOT13Q9NPJ3 140 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 C12orf4Q9NQ89 552 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 ZNF221Q9UK13 617 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 BLOC1S6Q9UL45 172 aa9.69□□□□□ -0.86
SGCA-202ENST00000344627 TRBV6-6A0A0A6YYG2 114 aa9.68□□□□□ -0.86
SGCA-202ENST00000344627 IGHV7-81A0A0B4J1V7 117 aa9.68□□□□□ -0.86
SGCA-202ENST00000344627 SEC14L6B5MCN3 397 aa9.68□□□□□ -0.86
SGCA-202ENST00000344627 PDCD5O14737 125 aa9.68□□□□□ -0.86
SGCA-202ENST00000344627 CD3GP09693 182 aa9.68□□□□□ -0.86
SGCA-202ENST00000344627 OR8U8P0C7N1 319 aa9.68□□□□□ -0.86
SGCA-202ENST00000344627 CT45A6P0DMU7 189 aa9.68□□□□□ -0.86
SGCA-202ENST00000344627 CT45A5P0DMU8 189 aa9.68□□□□□ -0.86
SGCA-202ENST00000344627 CT45A7P0DMV0 189 aa9.68□□□□□ -0.86
SGCA-202ENST00000344627 MYL9P24844 172 aa9.68□□□□□ -0.86
SGCA-202ENST00000344627 MC5RP33032 325 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms