RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 DOCK11Q5JSL3 2073 aa17.95■□□□□ 0.46
CCDC38-201ENST00000344280 PCP4L1A6NKN8 68 aa17.95■□□□□ 0.46
CCDC38-201ENST00000344280 KRASP01116 189 aa17.95■□□□□ 0.46
CCDC38-201ENST00000344280 SSTR5P35346 364 aa17.95■□□□□ 0.46
CCDC38-201ENST00000344280 CD200P41217 278 aa17.95■□□□□ 0.46
CCDC38-201ENST00000344280 GLIPR1P48060 266 aa17.95■□□□□ 0.46
CCDC38-201ENST00000344280 DEFB109BQ30KR1 87 aa17.95■□□□□ 0.46
CCDC38-201ENST00000344280 ACSF3Q4G176 576 aaPredicted RBP17.95■□□□□ 0.46
CCDC38-201ENST00000344280 BTNL3Q6UXE8 466 aa17.95■□□□□ 0.46
CCDC38-201ENST00000344280 SSX7Q7RTT5 188 aa17.95■□□□□ 0.46
CCDC38-201ENST00000344280 SMDT1Q9H4I9 107 aa17.95■□□□□ 0.46
CCDC38-201ENST00000344280 PIGBOS1A0A0B4J2F0 54 aa17.94■□□□□ 0.46
CCDC38-201ENST00000344280 PRR33A8MZF0 331 aa17.94■□□□□ 0.46
CCDC38-201ENST00000344280 TNFSF13O75888 250 aa17.94■□□□□ 0.46
CCDC38-201ENST00000344280 G6PCP35575 357 aa17.94■□□□□ 0.46
CCDC38-201ENST00000344280 SNRPEP62304 92 aaKnown RBP17.94■□□□□ 0.46
CCDC38-201ENST00000344280 TLE4Q04727 773 aa17.94■□□□□ 0.46
CCDC38-201ENST00000344280 IGHV3-43A0A0B4J1X8 118 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.93■□□□□ 0.46
CCDC38-201ENST00000344280 A0A1W2PPE3 182 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 H3BQ15 152 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 EIF3GO75821 320 aaKnown RBP eCLIP17.93■□□□□ 0.46
CCDC38-201ENST00000344280 IGHV3-43DP0DP04 118 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 HOXB1P14653 301 aaPredicted RBP17.93■□□□□ 0.46
CCDC38-201ENST00000344280 UBE2KP61086 200 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 RPS23P62266 143 aaKnown RBP17.93■□□□□ 0.46
CCDC38-201ENST00000344280 COL10A1Q03692 680 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 EIF4EBP1Q13541 118 aaPredicted RBP17.93■□□□□ 0.46
CCDC38-201ENST00000344280 SLC35E4Q6ICL7 350 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 RFESDQ8TAC1 157 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 SARAFQ96BY9 339 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 DCTN5Q9BTE1 182 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 IGHV2OR16-5A0A0B4J2B6 119 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 IGHV1-18A0A0C4DH31 117 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 OOEPA6NGQ2 149 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 RAB5BP61020 215 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 ZNF726P1Q15940 193 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 OR13A1Q8NGR1 328 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 PLSCR4Q9NRQ2 329 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 COA4Q9NYJ1 87 aa17.93■□□□□ 0.46
CCDC38-201ENST00000344280 SMG1Q96Q15 3661 aaKnown RBP17.93■□□□□ 0.46
CCDC38-201ENST00000344280 C17orf98A8MV24 154 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 KITLGP21583 273 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 HNF4GQ14541 408 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 MSMPQ1L6U9 139 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 ZNF506Q5JVG8 444 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 C1orf162Q8NEQ5 155 aaPredicted RBP17.92■□□□□ 0.46
CCDC38-201ENST00000344280 STARD4Q96DR4 205 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 ZMAT5Q9UDW3 170 aaKnown RBP17.92■□□□□ 0.46
CCDC38-201ENST00000344280 MMP24Q9Y5R2 645 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 DEFB108AA8MXU0 73 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 C1orf196B1AJZ1 125 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 S1PR2O95136 353 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 IGLV1-44P01699 117 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 RAB5AP20339 215 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 RNF212Q495C1 297 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 ALKBH2Q6NS38 261 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 SEM1Q6ZVN7 128 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 SCGB1C1Q8TD33 95 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 RAB39BQ96DA2 213 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 HIPK2Q9H2X6 1198 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 RBKSQ9H477 322 aa17.92■□□□□ 0.46
CCDC38-201ENST00000344280 ZNF71Q9NQZ8 489 aaPredicted RBP17.92■□□□□ 0.46
CCDC38-201ENST00000344280 ZNF98A6NK75 572 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 ZNF727A8MUV8 499 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 AGAP20933 346 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 LCN15Q6UWW0 184 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 DPPA3Q6W0C5 159 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 LILRB2Q8N423 598 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 OR4C12Q96R67 309 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 OR5H1A6NKK0 313 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 RNF212BA8MTL3 300 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 FGF8P55075 233 aaPredicted RBP17.91■□□□□ 0.46
CCDC38-201ENST00000344280 TNFRSF9Q07011 255 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 LRRC75BQ2VPJ9 315 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 OR8G2PQ6IF36 304 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 CD177Q8N6Q3 437 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 SNIP1Q8TAD8 396 aaKnown RBP17.91■□□□□ 0.46
CCDC38-201ENST00000344280 RBMXL1Q96E39 390 aaKnown RBP17.91■□□□□ 0.46
CCDC38-201ENST00000344280 GNG13Q9P2W3 67 aa17.91■□□□□ 0.46
CCDC38-201ENST00000344280 CLDN1O95832 211 aa17.9■□□□□ 0.46
CCDC38-201ENST00000344280 CGAP01215 116 aa17.9■□□□□ 0.46
CCDC38-201ENST00000344280 HSPB1P04792 205 aaKnown RBP17.9■□□□□ 0.46
CCDC38-201ENST00000344280 CD55P08174 381 aa17.9■□□□□ 0.46
CCDC38-201ENST00000344280 P0C879 139 aa17.9■□□□□ 0.46
CCDC38-201ENST00000344280 ZNF718Q3SXZ3 478 aa17.9■□□□□ 0.46
CCDC38-201ENST00000344280 ADAM5Q6NVV9 412 aa17.9■□□□□ 0.46
CCDC38-201ENST00000344280 ZNF665Q9H7R5 613 aa17.9■□□□□ 0.46
CCDC38-201ENST00000344280 RP1L1Q8IWN7 2480 aaPredicted RBP17.9■□□□□ 0.46
CCDC38-201ENST00000344280 GALR2O43603 387 aaPredicted RBP17.89■□□□□ 0.46
CCDC38-201ENST00000344280 GCH1P30793 250 aa17.89■□□□□ 0.46
CCDC38-201ENST00000344280 ZNF429Q86V71 674 aa17.89■□□□□ 0.46
CCDC38-201ENST00000344280 LRP11Q86VZ4 500 aa17.89■□□□□ 0.46
CCDC38-201ENST00000344280 PRR7Q8TB68 274 aa17.89■□□□□ 0.46
CCDC38-201ENST00000344280 YPEL4Q96NS1 127 aa17.89■□□□□ 0.46
CCDC38-201ENST00000344280 ODAMA1E959 279 aa17.89■□□□□ 0.45
CCDC38-201ENST00000344280 LINC00473A8K010 186 aa17.89■□□□□ 0.45
CCDC38-201ENST00000344280 PPIHO43447 177 aaKnown RBP17.89■□□□□ 0.45
CCDC38-201ENST00000344280 HBE1P02100 147 aa17.89■□□□□ 0.45
CCDC38-201ENST00000344280 EGR1P18146 543 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms