RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OR1L6Q8NGR2 347 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 CXCL14O95715 111 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 SPANXN5Q5MJ07 72 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 ADAMTS12P58397 1594 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 GPR6P46095 362 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 CDKN3Q16667 212 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 PQLC2Q6ZP29 291 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 H3BNC9 293 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 TSPOP30536 169 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 PHLDA2Q53GA4 152 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 TRMT61AQ96FX7 289 aaKnown RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 JPT1Q9UK76 154 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 CFAP20Q9Y6A4 193 aaKnown RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 SMAD7O15105 426 aaKnown RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 NDUFB3O43676 98 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 TNFP01375 233 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 FKBP1AP62942 108 aaKnown RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM25Q86YD3 366 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 CYB561D1Q8N8Q1 229 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF296Q8WUU4 475 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 MARF1Q9Y4F3 1742 aaKnown RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 A0A1W2PR48 441 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 KLK10O43240 276 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 CEACAM16Q2WEN9 425 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 FKBP1CQ5VVH2 108 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 R4GMQ9 66 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 C3orf85A0A1B0GTC6 90 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 A0A1W2PPI3 338 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 GAGE12HA6NDE8 117 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 LPAR6P43657 344 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 SH2D1BO14796 132 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 ALOX5APP20292 161 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 SELENOPP49908 381 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 DOK7Q18PE1 504 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 DUSP28Q4G0W2 176 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF658BQ4V348 819 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 KIF13AQ9H1H9 1805 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 GPR179Q6PRD1 2367 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 FAM90A26D6RGX4 464 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 LGALS4P56470 323 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 IGF2-ASQ6U949 168 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 MOB3BQ86TA1 216 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 PSENENQ9NZ42 101 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 TAAR2Q9P1P5 351 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 TDGF1P13385 188 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 FUT3P21217 361 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF324BQ6AW86 544 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 NPNTQ6UXI9 565 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 ZNRF2Q8NHG8 242 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 ZDHHC16Q969W1 377 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 C1QTNF4Q9BXJ3 329 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 LINC00303Q3SY05 128 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 DMKNQ6E0U4 476 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 OR10G7Q8NGN6 311 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 GPR82Q96P67 336 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 TUSC2O75896 110 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 LTBRP36941 435 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 MFAP2P55001 183 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 KLRD1Q13241 179 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 OR5C1Q8NGR4 320 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 LOC105371242A0A075B767 164 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 PPIAL4CA0A0B4J2A2 164 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 SYNGR3O43761 229 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 B4GALT3O60512 393 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 PPIAL4GP0DN37 164 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 DEPDC5O75140 1603 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 MYO18BQ8IUG5 2567 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 CLEC3AO75596 197 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 DYSFO75923 2080 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 CLDN7O95471 211 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 FAM106CPP0CH98 169 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 FAM106AQ4KMX7 169 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 TXNRD2Q9NNW7 524 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 CUL9Q8IWT3 2517 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 AMBPP02760 352 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 UCP3P55916 312 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 GJC3Q8NFK1 279 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 NDUFB4O95168 129 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 TAL2Q16559 108 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 FOXI2Q6ZQN5 318 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 OR8B12Q8NGG6 310 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 DNAJB12Q9NXW2 375 aaKnown RBP3.28□□□□□ -1.88
SYNE2-202ENST00000344113 MSRB2Q9Y3D2 182 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 CLDN5O00501 218 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 ACRV1P26436 265 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF595Q8IYB9 648 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 INSL5Q9Y5Q6 135 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 FANCMQ8IYD8 2048 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 APLNRP35414 380 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 ZP4Q12836 540 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 OR4F17Q8NGA8 305 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 OR5P3Q8WZ94 311 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 RTBDNQ9BSG5 229 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-202ENST00000344113 TCRBV7S3A2A0A539 114 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 K7N7A8 449 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 PPP1R3DO95685 299 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 FAM72AQ5TYM5 149 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 MBNL2Q5VZF2 373 aaKnown RBP3.28□□□□□ -1.88
SYNE2-202ENST00000344113 MLST8Q9BVC4 326 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 LHX9Q9NQ69 397 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms