RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CYB561A3Q8NBI2 242 aa6.17□□□□□ -1.42
ZNF540-202ENST00000343599 BHLHE23Q8NDY6 225 aa6.17□□□□□ -1.42
ZNF540-202ENST00000343599 AQP3Q92482 292 aa6.17□□□□□ -1.42
ZNF540-202ENST00000343599 PELI1Q96FA3 418 aa6.17□□□□□ -1.42
ZNF540-202ENST00000343599 NMNAT2Q9BZQ4 307 aa6.17□□□□□ -1.42
ZNF540-202ENST00000343599 RAB9BQ9NP90 201 aa6.17□□□□□ -1.42
ZNF540-202ENST00000343599 CMC2Q9NRP2 79 aa6.17□□□□□ -1.42
ZNF540-202ENST00000343599 LAMTOR2Q9Y2Q5 125 aa6.17□□□□□ -1.42
ZNF540-202ENST00000343599 DMXL2Q8TDJ6 3036 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 A0A1B0GU03 582 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 OR5B21A6NL26 309 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 CORTO00230 105 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 ST8SIA3O43173 380 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 HSPB1P04792 205 aaKnown RBP6.16□□□□□ -1.42
ZNF540-202ENST00000343599 UBE2NP61088 152 aaKnown RBP6.16□□□□□ -1.42
ZNF540-202ENST00000343599 HLA-DRB3P79483 266 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 OR4D6Q8NGJ1 314 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 OR5AK3PQ8NH89 298 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 NEURL3Q96EH8 262 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF479Q96JC4 524 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 OR11A1Q9GZK7 315 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 CTDSP1Q9GZU7 261 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 ABCA12Q86UK0 2595 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 HIVEP3Q5T1R4 2406 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF705FA8MVS1 300 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-202ENST00000343599 M0QYG6 137 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 NPIPB7O75200 414 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF705DP0CH99 300 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF705BP0CI00 300 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-202ENST00000343599 PNRC1Q12796 327 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-202ENST00000343599 EIPR1Q53HC9 387 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 ACTL10Q5JWF8 245 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 PRR27Q6MZM9 219 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 POC1AQ8NBT0 407 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 REEP6Q96HR9 211 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 ALG12Q9BV10 488 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 HCAR1Q9BXC0 346 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 HIPK2Q9H2X6 1198 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 BCL2L10Q9HD36 194 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF581Q9P0T4 197 aa6.16□□□□□ -1.42
ZNF540-202ENST00000343599 IGHV3-20A0A0C4DH32 117 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 TRBV2A0A0J9YWF9 115 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 MEIS3P1A6NDR6 274 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 DPRXA6NFQ7 191 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 AQP7P3A6NL99 342 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 INAFM1C9JVW0 142 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 UTS2O95399 124 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 AKR1C4P17516 323 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 GLRXP35754 106 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 ID2Q02363 134 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 ACOT6Q3I5F7 207 aaPredicted RBP6.15□□□□□ -1.42
ZNF540-202ENST00000343599 SNAI3Q3KNW1 292 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 FAM120AOSQ5T036 256 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 NRMQ8IXM6 262 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 C20orf196Q8IYI0 205 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 RPRMLQ8N4K4 120 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 STXBP6Q8NFX7 210 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF519Q8TB69 540 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 Q8TCH9 128 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 DDIT4LQ96D03 193 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 SDSLQ96GA7 329 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 MED20Q9H944 212 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 WFDC1Q9HC57 220 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 FBXL17Q9UF56 701 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 METRNQ9UJH8 293 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 SLC7A7Q9UM01 511 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 GTF3C1Q12789 2109 aa6.15□□□□□ -1.42
ZNF540-202ENST00000343599 TRAV18A0A075B6X5 111 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF736B4DX44 427 aaPredicted RBP6.15□□□□□ -1.43
ZNF540-202ENST00000343599 CRYGCP07315 174 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 CTRLP40313 264 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 GATA4P43694 442 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 FBXW4P57775 412 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 TAS2R31P59538 309 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 SLAQ13239 276 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 C5orf64Q2M2E5 130 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 SAMD13Q5VXD3 122 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 TMEM225Q6GV28 225 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 C12orf54Q6X4T0 127 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 MS4A10Q96PG2 267 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 CABLES2Q9BTV7 478 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 VAMP8Q9BV40 100 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 PARP12Q9H0J9 701 aaKnown RBP6.15□□□□□ -1.43
ZNF540-202ENST00000343599 MEGF9Q9H1U4 602 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 VCANP13611 3396 aa6.15□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF814B7Z6K7 855 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 K7N7A8 449 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 PPP1CCP36873 323 aaKnown RBP6.14□□□□□ -1.43
ZNF540-202ENST00000343599 FAM3BP58499 235 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-202ENST00000343599 RND3P61587 244 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 MEP1BQ16820 701 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF506Q5JVG8 444 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 MFSD12Q6NUT3 480 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 MBOAT2Q6ZWT7 520 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 COMMD2Q86X83 199 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 FAM219AQ8IW50 185 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 OR52R1Q8NGF1 315 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 OR10D3Q8NH80 312 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 TMEM106BQ9NUM4 274 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 KLRF1Q9NZS2 232 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms