RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 GAR1Q9NY12 217 aaKnown RBP20.27■□□□□ 0.84
NELFB-201ENST00000343053 TRBV6-6A0A0A6YYG2 114 aa20.27■□□□□ 0.83
NELFB-201ENST00000343053 TRGC1P0CF51 173 aa20.27■□□□□ 0.83
NELFB-201ENST00000343053 WDR25Q64LD2 544 aaPredicted RBP20.27■□□□□ 0.83
NELFB-201ENST00000343053 FGFRL1Q8N441 504 aa20.27■□□□□ 0.83
NELFB-201ENST00000343053 STRADBQ9C0K7 418 aa20.27■□□□□ 0.83
NELFB-201ENST00000343053 CLN8Q9UBY8 286 aa20.27■□□□□ 0.83
NELFB-201ENST00000343053 SLC38A11Q08AI6 406 aa20.26■□□□□ 0.83
NELFB-201ENST00000343053 C1orf210Q8IVY1 113 aa20.26■□□□□ 0.83
NELFB-201ENST00000343053 TPRX1Q8N7U7 411 aa20.26■□□□□ 0.83
NELFB-201ENST00000343053 GTF3AQ92664 365 aaKnown RBP20.26■□□□□ 0.83
NELFB-201ENST00000343053 LIN7CQ9NUP9 197 aaKnown RBP20.26■□□□□ 0.83
NELFB-201ENST00000343053 DPPA3Q6W0C5 159 aa20.26■□□□□ 0.83
NELFB-201ENST00000343053 ZNF383Q8NA42 475 aa20.26■□□□□ 0.83
NELFB-201ENST00000343053 ABHD5Q8WTS1 349 aa20.26■□□□□ 0.83
NELFB-201ENST00000343053 GATAD1Q8WUU5 269 aa20.26■□□□□ 0.83
NELFB-201ENST00000343053 OR2D2Q9H210 308 aa20.26■□□□□ 0.83
NELFB-201ENST00000343053 ARRDC1-AS1Q9H2J1 176 aa20.26■□□□□ 0.83
NELFB-201ENST00000343053 CISD1Q9NZ45 108 aaKnown RBP20.26■□□□□ 0.83
NELFB-201ENST00000343053 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.25■□□□□ 0.83
NELFB-201ENST00000343053 PSPNO60542 156 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 HBG1P69891 147 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 HBG2P69892 147 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 ADIRFQ15847 76 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 LRRC75BQ2VPJ9 315 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 RPUSD4Q96CM3 377 aaKnown RBP20.25■□□□□ 0.83
NELFB-201ENST00000343053 RTL8AQ9BWD3 113 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 WDR61Q9GZS3 305 aaKnown RBP20.25■□□□□ 0.83
NELFB-201ENST00000343053 LYZL6O75951 148 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 BMP5P22003 454 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 OR3A1P47881 315 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 TMPRSS7Q7RTY8 843 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 SNX22Q96L94 193 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 PKIBQ9C010 78 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 ABI3Q9P2A4 366 aa20.25■□□□□ 0.83
NELFB-201ENST00000343053 LAMA5O15230 3695 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 TUBG1P23258 451 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 RPL30P62888 115 aaKnown RBP20.24■□□□□ 0.83
NELFB-201ENST00000343053 PMP22Q01453 160 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 C1orf87Q8N0U7 546 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 OR52L2PQ8NGH6 319 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 LHX4Q969G2 390 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 LSM10Q969L4 123 aaKnown RBP20.24■□□□□ 0.83
NELFB-201ENST00000343053 ZDHHC16Q969W1 377 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 SIRT7Q9NRC8 400 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 FABP4P15090 132 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 RPP25LQ8N5L8 163 aaKnown RBP20.24■□□□□ 0.83
NELFB-201ENST00000343053 BCL2L2Q92843 193 aaPredicted RBP20.24■□□□□ 0.83
NELFB-201ENST00000343053 PLPPR2Q96GM1 343 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 C5orf30Q96GV9 206 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 FZR1Q9UM11 496 aa20.24■□□□□ 0.83
NELFB-201ENST00000343053 TRAV1-1A0A0B4J248 108 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 PGA5P0DJD9 388 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 SLC25A6P12236 298 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 PPP1CBP62140 327 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 RNFT1Q5M7Z0 435 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 TAF15Q92804 592 aaKnown RBP eCLIP20.23■□□□□ 0.83
NELFB-201ENST00000343053 IGHV3-43A0A0B4J1X8 118 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 PPP1R2P9O14990 202 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 IGHV3-43DP0DP04 118 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 AESQ08117 197 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 FBXW9Q5XUX1 488 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 ACSM6Q6P461 480 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 OPA3Q9H6K4 179 aa20.23■□□□□ 0.83
NELFB-201ENST00000343053 ZNF737O75373 536 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 LY86O95711 162 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 TBC1D28Q2M2D7 210 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 TMEM41BQ5BJD5 291 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 SLC25A40Q8TBP6 338 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 PRO3102Q9H379 93 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 SPRR3Q9UBC9 169 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 SMPD2O60906 423 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 SP1P08047 785 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 RTP5Q14D33 572 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 SPRY4Q9C004 299 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 GP6Q9HCN6 339 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 SDF2L1Q9HCN8 221 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 SLC39A9Q9NUM3 307 aa20.22■□□□□ 0.83
NELFB-201ENST00000343053 CLDN34H7C241 214 aa20.21■□□□□ 0.83
NELFB-201ENST00000343053 RBMXL2O75526 392 aaKnown RBP20.21■□□□□ 0.83
NELFB-201ENST00000343053 CYB5R3P00387 301 aaPredicted RBP20.21■□□□□ 0.83
NELFB-201ENST00000343053 LTC4SQ16873 150 aa20.21■□□□□ 0.83
NELFB-201ENST00000343053 PFDN5Q99471 154 aa20.21■□□□□ 0.83
NELFB-201ENST00000343053 SMIM7Q9BQ49 75 aa20.21■□□□□ 0.83
NELFB-201ENST00000343053 DEFB108AA8MXU0 73 aa20.21■□□□□ 0.83
NELFB-201ENST00000343053 S1PR2O95136 353 aa20.21■□□□□ 0.83
NELFB-201ENST00000343053 HIST3H2BBQ8N257 126 aa20.21■□□□□ 0.83
NELFB-201ENST00000343053 UFSP2Q9NUQ7 469 aa20.21■□□□□ 0.83
NELFB-201ENST00000343053 CXorf65A6NEN9 183 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 TNFRSF9Q07011 255 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 TFF3Q07654 80 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 SLC10A1Q14973 349 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 OR5T1Q8NG75 326 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 MBD3L1Q8WWY6 194 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 VAX2Q9UIW0 290 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 LRP5LA4QPB2 252 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 MPV17P39210 176 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 CD81P60033 236 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 RFESDQ8TAC1 157 aa20.2■□□□□ 0.82
NELFB-201ENST00000343053 MRGPRDQ8TDS7 321 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms