RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ACSM6Q6P461 480 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 WDR73Q6P4I2 378 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 NIT1Q86X76 327 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 SAXO1Q8IYX7 474 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 OR10V1Q8NGI7 309 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 TMEM150CB9EJG8 249 aa15.77■□□□□ 0.12
SMPD1-201ENST00000342245 J3QR06 171 aa15.77■□□□□ 0.12
SMPD1-201ENST00000342245 GALR2O43603 387 aaPredicted RBP15.77■□□□□ 0.12
SMPD1-201ENST00000342245 PGLYRP1O75594 196 aaPredicted RBP15.77■□□□□ 0.12
SMPD1-201ENST00000342245 C1QTNF9P0C862 333 aa15.77■□□□□ 0.12
SMPD1-201ENST00000342245 TIMP3P35625 211 aa15.77■□□□□ 0.12
SMPD1-201ENST00000342245 GUCA1AP43080 201 aaPredicted RBP15.77■□□□□ 0.12
SMPD1-201ENST00000342245 GATAD1Q8WUU5 269 aa15.77■□□□□ 0.12
SMPD1-201ENST00000342245 BORCS8Q96FH0 119 aa15.77■□□□□ 0.12
SMPD1-201ENST00000342245 UHRF2Q96PU4 802 aa15.77■□□□□ 0.12
SMPD1-201ENST00000342245 OR6C1Q96RD1 312 aa15.77■□□□□ 0.12
SMPD1-201ENST00000342245 H0YIG0 161 aa15.77■□□□□ 0.11
SMPD1-201ENST00000342245 SH2D1BO14796 132 aa15.77■□□□□ 0.11
SMPD1-201ENST00000342245 GDF9O60383 454 aa15.77■□□□□ 0.11
SMPD1-201ENST00000342245 OR1D5P58170 312 aa15.77■□□□□ 0.11
SMPD1-201ENST00000342245 GNB1P62873 340 aa15.77■□□□□ 0.11
SMPD1-201ENST00000342245 BORCS7Q96B45 105 aa15.77■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A26D6RGX4 464 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 HYAL1Q12794 435 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 PIGYQ3MUY2 71 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 ZNF776Q68DI1 518 aaPredicted RBP15.76■□□□□ 0.11
SMPD1-201ENST00000342245 TCF24Q7RTU0 167 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 KIR2DS1A0A191URI9 304 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 ZNF891A8MT65 544 aaPredicted RBP15.76■□□□□ 0.11
SMPD1-201ENST00000342245 F5H5K5 113 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 SLC31A1O15431 190 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 POU2F2P09086 479 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 IAPPP10997 89 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 PSG1P11464 419 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 KIR2DS4P43632 304 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 RHOBP62745 196 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 ARG2P78540 354 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 KIR2DS1Q14954 304 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 OR4P4Q8NGL7 312 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 TSACCQ96A04 125 aaPredicted RBP15.76■□□□□ 0.11
SMPD1-201ENST00000342245 NUDT22Q9BRQ3 303 aa15.76■□□□□ 0.11
SMPD1-201ENST00000342245 TRAV9-2A0A087WT02 112 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 A0A0G2JRQ6 117 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A10PA6NDY2 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A18PA6NE21 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A16PA6NEW6 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A20PA6NIJ5 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A8PA6NJQ4 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A7PA6NKC0 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A22PA8MWA6 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A12PA8MX19 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A5PA8MXJ8 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A23PA8MXZ1 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 RAMP3O60896 148 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 ZNF324O75467 553 aaPredicted RBP15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A15PP0C7V4 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A13PP0C7W8 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A14PP0C7W9 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 FAM90A24PP0C7X0 464 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 C3orf79P0CE67 100 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 GLB1P16278 677 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 MFAP5Q13361 173 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 HIST3H3Q16695 136 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 BRICD5Q6PL45 260 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 TMEM147Q9BVK8 224 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 GNB4Q9HAV0 340 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 IL23AQ9NPF7 189 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 CCL28Q9NRJ3 127 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 C5orf63A6NC05 138 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 TLX3O43711 291 aaPredicted RBP15.75■□□□□ 0.11
SMPD1-201ENST00000342245 OR4F17Q8NGA8 305 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 ZNF596Q8TC21 504 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 SPTSSAQ969W0 71 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 SFXN3Q9BWM7 321 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 CACNG5Q9UF02 275 aa15.75■□□□□ 0.11
SMPD1-201ENST00000342245 NDUFB4O95168 129 aa15.74■□□□□ 0.11
SMPD1-201ENST00000342245 OTX1P32242 354 aaPredicted RBP15.74■□□□□ 0.11
SMPD1-201ENST00000342245 LGALS4P56470 323 aa15.74■□□□□ 0.11
SMPD1-201ENST00000342245 RBM11P57052 281 aaKnown RBP15.74■□□□□ 0.11
SMPD1-201ENST00000342245 OR4A47Q6IF82 309 aa15.74■□□□□ 0.11
SMPD1-201ENST00000342245 Q6ZPA2 131 aa15.74■□□□□ 0.11
SMPD1-201ENST00000342245 QTRT1Q9BXR0 403 aaKnown RBP15.74■□□□□ 0.11
SMPD1-201ENST00000342245 A0A1W2PS18 150 aa15.74■□□□□ 0.11
SMPD1-201ENST00000342245 SNURFLB1AK76 121 aa15.74■□□□□ 0.11
SMPD1-201ENST00000342245 HMGB3O15347 200 aaKnown RBP15.74■□□□□ 0.11
SMPD1-201ENST00000342245 SMIM21Q3B7S5 101 aa15.74■□□□□ 0.11
SMPD1-201ENST00000342245 TMEM14EPQ6UXP3 125 aa15.74■□□□□ 0.11
SMPD1-201ENST00000342245 CDH23Q9H251 3354 aa15.74■□□□□ 0.11
SMPD1-201ENST00000342245 COL5A1P20908 1838 aaPredicted RBP15.73■□□□□ 0.11
SMPD1-201ENST00000342245 AQP7P3A6NL99 342 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 RBFOX2O43251 390 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMPD1-201ENST00000342245 HNRNPA1P09651 372 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMPD1-201ENST00000342245 C17orf67Q0P5P2 114 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 MYBPHQ13203 477 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 C2orf27AQ580R0 203 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 SPANXN5Q5MJ07 72 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 FAM71F2Q6NXP2 309 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 VWA1Q6PCB0 445 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 KIR2DS5A0A0G2JLQ3 304 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 A0A0G2JNG1 304 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms