RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 AIFM2Q9BRQ8 373 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 CXXC4Q9H2H0 198 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 SPTA1P02549 2419 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 SPRY3O43610 288 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 COX5AP20674 150 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 DHRS7BQ6IAN0 325 aaPredicted RBP8.68□□□□□ -1.02
LIMA1-201ENST00000341247 ACP7Q6ZNF0 438 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 FGFRL1Q8N441 504 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 ZNF71Q9NQZ8 489 aaPredicted RBP8.68□□□□□ -1.02
LIMA1-201ENST00000341247 SYNGR2O43760 224 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 ARG1P05089 322 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 EGR1P18146 543 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 BEND4Q6ZU67 534 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 MOB1BQ7L9L4 216 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 TCTEX1D2Q8WW35 142 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 S100PBPQ96BU1 408 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 C5orf30Q96GV9 206 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 KCNJ16Q9NPI9 418 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 PSG11Q9UQ72 335 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 KIAA1324LA8MWY0 1029 aaPredicted RBP8.68□□□□□ -1.02
LIMA1-201ENST00000341247 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.68□□□□□ -1.02
LIMA1-201ENST00000341247 CLDN1O95832 211 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 CRYBA1P05813 215 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 IGFL2Q6UWQ7 119 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 VSIRQ9H7M9 311 aa8.68□□□□□ -1.02
LIMA1-201ENST00000341247 A0A1B0GU03 582 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 RPL35P42766 123 aaKnown RBP8.67□□□□□ -1.02
LIMA1-201ENST00000341247 FGF8P55075 233 aaPredicted RBP8.67□□□□□ -1.02
LIMA1-201ENST00000341247 ELLP55199 621 aaPredicted RBP8.67□□□□□ -1.02
LIMA1-201ENST00000341247 HMGN3Q15651 99 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 LILRB2Q8N423 598 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 LYPD6BQ8NI32 183 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 IFT22Q9H7X7 185 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 MBNL3Q9NUK0 354 aaKnown RBP8.67□□□□□ -1.02
LIMA1-201ENST00000341247 LIN7CQ9NUP9 197 aaKnown RBP8.67□□□□□ -1.02
LIMA1-201ENST00000341247 STRAPQ9Y3F4 350 aaKnown RBP8.67□□□□□ -1.02
LIMA1-201ENST00000341247 PCP4L1A6NKN8 68 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 TMEM210A6NLX4 147 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 ZNF891A8MT65 544 aaPredicted RBP8.67□□□□□ -1.02
LIMA1-201ENST00000341247 C17orf98A8MV24 154 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 IFNA5P01569 189 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 SELLP14151 372 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 EDDM3BP56851 147 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 Q3ZCU0 254 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 LCN15Q6UWW0 184 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 SSX9Q7RTT3 188 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 DEFB108BQ8NET1 73 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 PRSS33Q8NF86 280 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 ATP5SQ99766 215 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 SCRT1Q9BWW7 348 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 PLSCR4Q9NRQ2 329 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 KPTNQ9Y664 436 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 DUXBA0A1W2PPF3 345 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 C7orf77A4D0Y5 90 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 CLEC18AA5D8T8 446 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 HMGB3O15347 200 aaKnown RBP8.67□□□□□ -1.02
LIMA1-201ENST00000341247 S1PR2O95136 353 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 CD55P08174 381 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 BMP5P22003 454 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 ZNF474Q6S9Z5 364 aaPredicted RBP8.67□□□□□ -1.02
LIMA1-201ENST00000341247 CD177Q8N6Q3 437 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 CLEC18CQ8NCF0 446 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 ZNRF1Q8ND25 227 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 CLN8Q9UBY8 286 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 WIPI2Q9Y4P8 454 aa8.67□□□□□ -1.02
LIMA1-201ENST00000341247 J3QW42 95 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 CTRB1P17538 263 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 SULT1A1P50225 295 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 RAB5CP51148 216 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 CTRB2Q6GPI1 263 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 MOGAT3Q86VF5 341 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 LEAP2Q969E1 77 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 IL22RA2Q969J5 263 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 PBDC1Q9BVG4 233 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 A0A1W2PPE3 182 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 AHRRA9YTQ3 701 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 FAM27E3Q08E93 113 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 SMIM21Q3B7S5 101 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 SPSB3Q6PJ21 355 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 C22orf34Q6ZV56 151 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 SCGB1C1Q8TD33 95 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 NDRG3Q9UGV2 375 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 A0A1W2PPE2 198 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 OOEPA6NGQ2 149 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 SOHLH1Q5JUK2 328 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 HAPLN4Q86UW8 402 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 ZDHHC16Q969W1 377 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 OR2V2Q96R30 315 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 HES4Q9HCC6 221 aa8.66□□□□□ -1.02
LIMA1-201ENST00000341247 UBE2L5PA0A1B0GUS4 154 aa8.65□□□□□ -1.02
LIMA1-201ENST00000341247 A0A1W2PPH5 198 aa8.65□□□□□ -1.02
LIMA1-201ENST00000341247 ZFP92A6NM28 416 aa8.65□□□□□ -1.02
LIMA1-201ENST00000341247 CGAP01215 116 aa8.65□□□□□ -1.02
LIMA1-201ENST00000341247 PRDX2P32119 198 aa8.65□□□□□ -1.02
LIMA1-201ENST00000341247 RAB40CQ96S21 281 aa8.65□□□□□ -1.02
LIMA1-201ENST00000341247 SLC35B3Q9H1N7 401 aa8.65□□□□□ -1.02
LIMA1-201ENST00000341247 GNG12Q9UBI6 72 aa8.65□□□□□ -1.02
LIMA1-201ENST00000341247 FAM215AQ9Y5M1 114 aa8.65□□□□□ -1.02
LIMA1-201ENST00000341247 SLC25A15Q9Y619 301 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms