RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 A0A0A6YYD4 124 aa12.55□□□□□ -0.4
RET-201ENST00000340058 CRYM-AS1A6NIL9 109 aa12.55□□□□□ -0.4
RET-201ENST00000340058 MBP02144 154 aa12.55□□□□□ -0.4
RET-201ENST00000340058 OR4A8P0C604 315 aa12.55□□□□□ -0.4
RET-201ENST00000340058 CDC34P49427 236 aaPredicted RBP12.55□□□□□ -0.4
RET-201ENST00000340058 TMEM65Q6PI78 240 aa12.55□□□□□ -0.4
RET-201ENST00000340058 SLC25A28Q96A46 364 aa12.55□□□□□ -0.4
RET-201ENST00000340058 GAL3ST2Q9H3Q3 398 aa12.55□□□□□ -0.4
RET-201ENST00000340058 PPP1R14DQ9NXH3 145 aa12.55□□□□□ -0.4
RET-201ENST00000340058 PRRC2CQ9Y520 2896 aaKnown RBP12.55□□□□□ -0.4
RET-201ENST00000340058 IGHV1-2P23083 117 aa12.55□□□□□ -0.4
RET-201ENST00000340058 HOXA6P31267 233 aa12.55□□□□□ -0.4
RET-201ENST00000340058 FABP9Q0Z7S8 132 aa12.55□□□□□ -0.4
RET-201ENST00000340058 Q6ZT83 130 aa12.55□□□□□ -0.4
RET-201ENST00000340058 FGFRL1Q8N441 504 aa12.55□□□□□ -0.4
RET-201ENST00000340058 BMPERQ8N8U9 685 aa12.55□□□□□ -0.4
RET-201ENST00000340058 ATP5SQ99766 215 aa12.55□□□□□ -0.4
RET-201ENST00000340058 GFRA3O60609 400 aa12.55□□□□□ -0.4
RET-201ENST00000340058 CLEC3BP05452 202 aa12.55□□□□□ -0.4
RET-201ENST00000340058 CD200P41217 278 aa12.55□□□□□ -0.4
RET-201ENST00000340058 ZNF439Q8NDP4 499 aa12.55□□□□□ -0.4
RET-201ENST00000340058 BSCL2Q96G97 398 aaPredicted RBP12.55□□□□□ -0.4
RET-201ENST00000340058 ZNF665Q9H7R5 613 aa12.55□□□□□ -0.4
RET-201ENST00000340058 ODAMA1E959 279 aa12.54□□□□□ -0.4
RET-201ENST00000340058 C7orf77A4D0Y5 90 aa12.54□□□□□ -0.4
RET-201ENST00000340058 SULT1A1P50225 295 aa12.54□□□□□ -0.4
RET-201ENST00000340058 RAB13P51153 203 aa12.54□□□□□ -0.4
RET-201ENST00000340058 ZNF880Q6PDB4 577 aa12.54□□□□□ -0.4
RET-201ENST00000340058 UBTD1Q9HAC8 227 aa12.54□□□□□ -0.4
RET-201ENST00000340058 MALRD1Q5VYJ5 2156 aa12.54□□□□□ -0.4
RET-201ENST00000340058 RAB7AP51149 207 aa12.54□□□□□ -0.4
RET-201ENST00000340058 LINC01560Q8TB33 94 aa12.54□□□□□ -0.4
RET-201ENST00000340058 WBP1Q96G27 269 aa12.54□□□□□ -0.4
RET-201ENST00000340058 REPIN1Q9BWE0 567 aaKnown RBP12.54□□□□□ -0.4
RET-201ENST00000340058 SLC25A10Q9UBX3 287 aaPredicted RBP12.54□□□□□ -0.4
RET-201ENST00000340058 FAM74A7A6NL05 159 aa12.54□□□□□ -0.4
RET-201ENST00000340058 MELTFP08582 738 aa12.54□□□□□ -0.4
RET-201ENST00000340058 TAS2R45P59539 299 aa12.54□□□□□ -0.4
RET-201ENST00000340058 FOXF2Q12947 444 aa12.54□□□□□ -0.4
RET-201ENST00000340058 FAM74A3Q4VXF1 159 aa12.54□□□□□ -0.4
RET-201ENST00000340058 FAM78BQ5VT40 261 aa12.54□□□□□ -0.4
RET-201ENST00000340058 UQCC3Q6UW78 93 aa12.54□□□□□ -0.4
RET-201ENST00000340058 GGNQ86UU5 652 aa12.54□□□□□ -0.4
RET-201ENST00000340058 TGIF2LYQ8IUE0 185 aa12.54□□□□□ -0.4
RET-201ENST00000340058 TGIF2LXQ8IUE1 241 aa12.54□□□□□ -0.4
RET-201ENST00000340058 WDYHV1Q96HA8 205 aa12.54□□□□□ -0.4
RET-201ENST00000340058 TMEM147Q9BVK8 224 aa12.54□□□□□ -0.4
RET-201ENST00000340058 SCNM1Q9BWG6 230 aa12.54□□□□□ -0.4
RET-201ENST00000340058 HSF4Q9ULV5 492 aa12.54□□□□□ -0.4
RET-201ENST00000340058 IGKV1-12A0A0C4DH73 117 aa12.53□□□□□ -0.4
RET-201ENST00000340058 RAB19A4D1S5 217 aa12.53□□□□□ -0.4
RET-201ENST00000340058 IGKV1D-12P01611 117 aa12.53□□□□□ -0.4
RET-201ENST00000340058 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
RET-201ENST00000340058 OR5P3Q8WZ94 311 aa12.53□□□□□ -0.4
RET-201ENST00000340058 DEDDO75618 318 aa12.53□□□□□ -0.4
RET-201ENST00000340058 HKR1P10072 659 aa12.53□□□□□ -0.4
RET-201ENST00000340058 ERVFC1-1P60608 527 aa12.53□□□□□ -0.4
RET-201ENST00000340058 SPRR3Q9UBC9 169 aa12.53□□□□□ -0.4
RET-201ENST00000340058 PPIAL4EA0A075B759 164 aa12.53□□□□□ -0.4
RET-201ENST00000340058 PPIAL4DF5H284 164 aa12.53□□□□□ -0.4
RET-201ENST00000340058 MGST3O14880 152 aa12.53□□□□□ -0.4
RET-201ENST00000340058 PAGE4O60829 102 aa12.53□□□□□ -0.4
RET-201ENST00000340058 PPIAL4FP0DN26 164 aa12.53□□□□□ -0.4
RET-201ENST00000340058 SMUG1Q53HV7 270 aa12.53□□□□□ -0.4
RET-201ENST00000340058 CORO2AQ92828 525 aa12.53□□□□□ -0.4
RET-201ENST00000340058 TLNRD1Q9H1K6 362 aa12.53□□□□□ -0.4
RET-201ENST00000340058 MS4A5Q9H3V2 200 aa12.53□□□□□ -0.4
RET-201ENST00000340058 PPIAL4AQ9Y536 164 aa12.53□□□□□ -0.4
RET-201ENST00000340058 LRRK1Q38SD2 2015 aa12.53□□□□□ -0.4
RET-201ENST00000340058 F8VVB4 439 aa12.52□□□□□ -0.4
RET-201ENST00000340058 F8VWA3 439 aa12.52□□□□□ -0.4
RET-201ENST00000340058 CA11O75493 328 aa12.52□□□□□ -0.4
RET-201ENST00000340058 RAB4AP20338 218 aa12.52□□□□□ -0.4
RET-201ENST00000340058 TCL1AP56279 114 aa12.52□□□□□ -0.4
RET-201ENST00000340058 STPG2Q8N412 459 aa12.52□□□□□ -0.4
RET-201ENST00000340058 TMEM210A6NLX4 147 aa12.52□□□□□ -0.4
RET-201ENST00000340058 KCNMB1Q16558 191 aa12.52□□□□□ -0.4
RET-201ENST00000340058 ZNF385CQ66K41 422 aaPredicted RBP12.52□□□□□ -0.4
RET-201ENST00000340058 OR10A7Q8NGE5 316 aa12.52□□□□□ -0.41
RET-201ENST00000340058 OR4P4Q8NGL7 312 aa12.52□□□□□ -0.41
RET-201ENST00000340058 BCL2L2Q92843 193 aaPredicted RBP12.52□□□□□ -0.41
RET-201ENST00000340058 TMEM56Q96MV1 263 aa12.52□□□□□ -0.41
RET-201ENST00000340058 CTDSP1Q9GZU7 261 aa12.52□□□□□ -0.41
RET-201ENST00000340058 HILPDAQ9Y5L2 63 aa12.52□□□□□ -0.41
RET-201ENST00000340058 IGLV3-32A0A0A0MS00 114 aa12.52□□□□□ -0.41
RET-201ENST00000340058 S1PR2O95136 353 aa12.52□□□□□ -0.41
RET-201ENST00000340058 PLAUP00749 431 aa12.52□□□□□ -0.41
RET-201ENST00000340058 CTSSP25774 331 aa12.52□□□□□ -0.41
RET-201ENST00000340058 ZNF345Q14585 488 aa12.52□□□□□ -0.41
RET-201ENST00000340058 PUSL1Q8N0Z8 303 aaKnown RBP12.52□□□□□ -0.41
RET-201ENST00000340058 DRAM1Q8N682 238 aa12.52□□□□□ -0.41
RET-201ENST00000340058 C12orf57Q99622 126 aa12.52□□□□□ -0.41
RET-201ENST00000340058 RTBDNQ9BSG5 229 aaPredicted RBP12.52□□□□□ -0.41
RET-201ENST00000340058 CISD1Q9NZ45 108 aaKnown RBP12.52□□□□□ -0.41
RET-201ENST00000340058 INSIG2Q9Y5U4 225 aa12.52□□□□□ -0.41
RET-201ENST00000340058 ARFGEF3Q5TH69 2177 aa12.51□□□□□ -0.41
RET-201ENST00000340058 A0A1B0GU03 582 aa12.51□□□□□ -0.41
RET-201ENST00000340058 ATXN7O15265 892 aaPredicted RBP12.51□□□□□ -0.41
RET-201ENST00000340058 NAAAQ02083 359 aa12.51□□□□□ -0.41
RET-201ENST00000340058 GABRA6Q16445 453 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms