RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 VKORC1L1Q8N0U8 176 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 A0A1B0GU03 582 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 CA11O75493 328 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 ZNF90Q03938 601 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 SCCPDHQ8NBX0 429 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 GGACTQ9BVM4 153 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 VAX2Q9UIW0 290 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 MED13Q9UHV7 2174 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 CXorf65A6NEN9 183 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 OR7C2O60412 319 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 SRP19P09132 144 aaKnown RBP9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 TRGC1P0CF51 173 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 HIST3H3Q16695 136 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 KHDC3LQ587J8 217 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 C16orf82Q7Z2V1 217 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 LEAP2Q969E1 77 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 RNF122Q9H9V4 155 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 COL6A6A6NMZ7 2263 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 SEC14L6B5MCN3 397 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 ZG16O60844 167 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 ACOT6Q3I5F7 207 aaPredicted RBP9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 HES3Q5TGS1 186 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 GGNQ86UU5 652 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 H1FXQ92522 213 aaKnown RBP9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 ZDHHC16Q969W1 377 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 MUCL1Q96DR8 90 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 DCTN5Q9BTE1 182 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 PQLC2LA1A4F0 135 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 KIAA1324LA8MWY0 1029 aaPredicted RBP9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 CDC34P49427 236 aaPredicted RBP9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 DEFB109BQ30KR1 87 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 ZNF718Q3SXZ3 478 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 FBXW9Q5XUX1 488 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 RCC1LQ96I51 464 aaKnown RBP9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 PCGF1Q9BSM1 259 aa9.44□□□□□ -0.9
SEMA4D-201ENST00000339861 EML6Q6ZMW3 1958 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 TRAV38-1A0A0B4J264 116 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 LRRC3CA6NJW4 275 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 C11orf94C9JXX5 98 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 K7N7A8 449 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 RPP30P78346 268 aaKnown RBP9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 SPNS3Q6ZMD2 512 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 LYPD6Q86Y78 171 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 S1PR3Q99500 378 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 REPIN1Q9BWE0 567 aaKnown RBP9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 PRDM14Q9GZV8 571 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 CRIM1Q9NZV1 1036 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 A8MXE2 369 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 F6UZH7 168 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 SSTR5P35346 364 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 UCP3P55916 312 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 LINC00205P59089 165 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 RPL19P84098 196 aaKnown RBP9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 Q0VFX4 171 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 ZNF385CQ66K41 422 aaPredicted RBP9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 DRAM1Q8N682 238 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 OR5D13Q8NGL4 314 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 A0A087X0M5 115 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 A0A0G2JRQ6 117 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 A0A1B0GX30 115 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 ENSAO43768 121 aaKnown RBP9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 S1PR2O95136 353 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 CXCL1P09341 107 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 LYG1Q8N1E2 194 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 OR10A7Q8NGE5 316 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 IL22RA2Q969J5 263 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 COA4Q9NYJ1 87 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 PLA2G2EQ9NZK7 142 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 EYSQ5T1H1 3165 aa9.43□□□□□ -0.9
SEMA4D-201ENST00000339861 PTPRSQ13332 1948 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 HBZP02008 142 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 SP1P08047 785 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 UCP1P25874 307 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 G0S2P27469 103 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 SMIM21Q3B7S5 101 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 LURAP1Q96LR2 239 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 UHRF2Q96PU4 802 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 GPR87Q9BY21 358 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 ZDHHC11Q9H8X9 412 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 CFAP54Q96N23 3096 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 ZFHX2Q9C0A1 2572 aaPredicted RBP9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 HSPB1P04792 205 aaKnown RBP9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 THBS3P49746 956 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 C20orf204Q6ZNR8 217 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 MRGPRGQ86SM5 289 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 H1FOOQ8IZA3 346 aaPredicted RBP9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 OR4D5Q8NGN0 318 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 TAF15Q92804 592 aaKnown RBP eCLIP9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 LRFN3Q9BTN0 628 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 PLCE1Q9P212 2302 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 LINC01387J3KSC0 135 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 MT-CO2P00403 227 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 OTX1P32242 354 aaPredicted RBP9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 GLIPR1P48060 266 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 PLPPR1Q8TBJ4 325 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 R3HDM4Q96D70 268 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 TMEM147Q9BVK8 224 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 C1QTNF5Q9BXJ0 243 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 NAT8Q9UHE5 227 aa9.42□□□□□ -0.9
SEMA4D-201ENST00000339861 TRAPPC1Q9Y5R8 145 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms