RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 NUDCD2Q8WVJ2 157 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 PLSCR4Q9NRQ2 329 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 KCNE5Q9UJ90 142 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 SPRY3O43610 288 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 PSCAO43653 123 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 P01737 135 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 FAM106CPP0CH98 169 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 SNRPBP14678 240 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 LSM11P83369 360 aaKnown RBP eCLIP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 LTC4SQ16873 150 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 Q6ZSR9 355 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 MSLNLQ96KJ4 702 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 OR5M11Q96RB7 305 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 PRR14Q9BWN1 585 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 MMP25Q9NPA2 562 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 FSCN3Q9NQT6 498 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 SLC22A13Q9Y226 551 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 TET2Q6N021 2002 aaPredicted RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 RBMY1BA6NDE4 496 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 RBMY1EA6NEQ0 496 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 THY1P04216 161 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 RBMY1DP0C7P1 496 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 RBMY1A1P0DJD3 496 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 RBMY1CP0DJD4 496 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 ATF1P18846 271 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 FCGR2CP31995 323 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 EDDM3AQ14507 147 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 MOB3BQ86TA1 216 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 ST6GAL2Q96JF0 529 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 VGLL1Q99990 258 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 TMUB1Q9BVT8 246 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 OOEPA6NGQ2 149 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 ADAM20O43506 726 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 ATP5G1P05496 136 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 ASAH2BP0C7U1 165 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 ATP5G3P48201 142 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 ATP5G2Q06055 141 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 MAJINQ3KP22 176 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 OR2G6Q5TZ20 316 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 LIMS2Q7Z4I7 341 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 GPR32P1Q8NGA4 272 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 WBP1Q96G27 269 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 AICDAQ9GZX7 198 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 CNTD2Q9H8S5 307 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 IL36GQ9NZH8 169 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 LRP4O75096 1905 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 HPXP02790 462 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 SNU13P55769 128 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 ANKRD34AQ69YU3 496 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 SPINK14Q6IE38 97 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 MOGAT3Q86VF5 341 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 LSM10Q969L4 123 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 C2orf88Q9BSF0 95 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 CXXC4Q9H2H0 198 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 NXT2Q9NPJ8 142 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 OR11H12B2RN74 326 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 E9PLN8 166 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 P2RY10O00398 339 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 OR3A4PP47883 348 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 FOXL1Q12952 345 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 EBPQ15125 230 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 TBR1Q16650 682 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 KIAA1644Q3SXP7 199 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 PQLC3Q8N755 202 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 ST6GALNAC3Q8NDV1 305 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 BEND2Q8NDZ0 799 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 OR11H1Q8NG94 326 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 OR11H2Q8NH07 326 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 CNIH3Q8TBE1 160 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 OR51E1Q8TCB6 317 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 LGALS14Q8TCE9 139 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 RGP1Q92546 391 aaPredicted RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 SNRNP40Q96DI7 357 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 STARD4Q96DR4 205 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 MRAP2Q96G30 205 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 VKORC1Q9BQB6 163 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 HCSTQ9UBK5 93 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 IER3IP1Q9Y5U9 82 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 TNRC6AQ8NDV7 1962 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 GDF9O60383 454 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 DXOO77932 396 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 PRSS23O95084 383 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 SRD5A2P31213 254 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 PLP1P60201 277 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 MGAT2Q10469 447 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 PIP5KL1Q5T9C9 394 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 CIARTQ8N365 385 aaPredicted RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 KIR3DL3Q8N743 410 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 SIGLEC12Q96PQ1 595 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 TPPP3Q9BW30 176 aa2.88□□□□□ -1.95
CSMD3-202ENST00000339701 MRPS18AQ9NVS2 196 aaKnown RBP2.88□□□□□ -1.95
CSMD3-202ENST00000339701 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-202ENST00000339701 A0A0U1RQK1 487 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 ZNF320A2RRD8 509 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 MPTX1A8MV57 137 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 CH25HO95992 272 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 TAS2R60P59551 318 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 MMDQ15546 238 aa2.87□□□□□ -1.95
CSMD3-202ENST00000339701 NEGR1Q7Z3B1 354 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms